Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1697 ATGGCGATGGCTGTGGCTCAACACAGAGAAAACAGCAGTGGGAGCATTAACAAGCACCTTGATTCCGGCAAATATGTTCGATACACGGCTGAGCAAGTTGAAGCGCTCGAACGGGTTTATGCTGAGTGCCCCAAGCCGAGCTCCTTGCGAAGGCAGCAGCTTGTCCGAGAGTGTCCCATTCTTGCCAACATCGATCCTAAGCAAATCAAAGTTTGGTTCCAGAATCGCAGGTGTAGAGAGAAGCAGAGAAAAGAGTCTTGCCAGCTTCAAACTGTAAACCGTAAGCTCACAGCGATGAACAAGTTGTTGATGGAGGAAAATGATCGGTTGCAGAAACAGGTGTCACAACTAGTATGCGAGAATGGATATATGCGGCAGCATTTGCAAGCTCCATCAGCGGCAAATACTGATGCAAGTTGTGATTCAGTTGTTACTACTCCTCAGCATTCTTTAAGAGATGCTAATAGCCCTGCTGGACTCCTATCAATTGCAGAGGAGACCTTGGCAGCTTTCCTTTCAAAGGCTACGGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGTAGTAAAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTAGAACCAACTAAGATTGCAGAGATACTAAAAGATCGTCCATCTTGGTTTCGGGATTGTCGGAGCCTAGAGGTTTTCACAATGTTTACTGCAGGAAATGGAGGAACTATAGAACTTGTTTACACTCAGACATATGCTCCAACAACGCTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGACAATGGCAGTCTCCTGGTTTGTGAAAGGTCACTGTCTGGTTCTGGTGCTGGTCCTAATGCTGCTGCTGCTGCTCAATTTGTGAGAGCTGAAATGCTCCCTAGTGGCTACTTAATTCGACCATGTGATGGTGGAGGGTCAATCATCCACGTTGTAGACCACCTAAATCTCGAGGCTTGGAGTGTGCCAGAGGTGCTTCGACCACTTTACGAATCATCAAAAGTGATAGCACAGAGAAATACAATTGCAGCACTTCGCTATATCAGGCAAATAGCACAGGAAACTAGTGGTGAAGTGGTATATGGTTTGGGTAGGCAACCTGCTGTTCTGCGAACTTTCAGCCAGAGGTTGTGCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGGTGGTCTGTACTGAACTGTGATGGTTCTGAGGATGTGATTATTGCAGTTAATTCACCCAAGAATTTGAGTAGCACTTCTAATCCAGCAAGTTCCCTGACATTTGTTGGAGGAATTCTGTGTGCAAAGGCTTCCATGTTGCTCCAAAATGTTCCCCCGGCAGTTTTGGTCCGCTTTCTCAGGGAGCACCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTATTGTGCTGCATCACTGAAAGCTGGCTCCTATGCCTATCCTGGAATGAGGCCTACAAGGTTCACTGGCAGTCAAGTCATCATGCCTCTTGGACATACAATTGAACAGGAGGAGATGCTTGAAGTTATTCGGCTTGAAGGCCACTCTCTTGCTCAAGAGGATGCCTTTGTTTCTAAGGACATTCATCTCCTACAGATATGTAGTGGAATAGATGAGAATGCTGTGGGAGCTTATTCTGAACTCATATTTGCTTCAATAGATGAAATGTTCCCGGATGATGCTCCATTGGTGCCTTCTGGTTTCCGTGTCATCCCATTGGATTCAAAACCAGGTGATAAAAAGGATGTGTTGACTAGAAGTCGGACCCTGGATTTGACATCTGGTCTTGAAGTGGGCCCAGCAACAAATCATGCTACAGAAGATAAATCATTATGTCATAACACTCGATCAGTGTTGACAATTGCCTTTCAGTTTCCTTTTGACAGCAATTTGCAGGACAGTGTTGCAATTATGGCACGTCAGTATGTCCGTAGTGTGATATCCTCTGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGGGTAAACCCAGCTGTTGGGCCAAAATTGTCTCCTGGCTCCCCAGAAGCTCTTACATTAGCTCACTGGATCTGCCAAAGTTACAGCTACTATTTGGGAACGGAATTACTGAGACCTGATTCTCTTGTTGGTGACTCAGTGCTGAAACATTTATGGCATCATCAGGATGCCATTTTGTGCTGCTCATTGAAGTCTCTGCCACTGTTCATCTTTGCAAACCAGGCAGGGCTTGACATGCTGGAAACCACTCTAGTGGCTTTACAAGACATCACATTGGATAAAATATTTGATGAGTCGGGGCGGAAGGCATTGTGTGCAGAGTTTGGCACGTTAATGGAGCAGGGTTTTGCTTATCTGCCGGCTGGGATATGCATGTCCACGATGGGCCGGCATGTTTCATTTGACCAAGCCATCGCTTGGAAAGTACTTGCTGCAGAAAATGACACTGTTCATTGTTTGGCTTTCTCTTTCGTAAATTGGTCATTTGTGTGA 2529 0.4638 MAMAVAQHRENSSGSINKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRECPILANIDPKQIKVWFQNRRCREKQRKESCQLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQHLQAPSAANTDASCDSVVTTPQHSLRDANSPAGLLSIAEETLAAFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSKVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFTAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLDNGSLLVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHVVDHLNLEAWSVPEVLRPLYESSKVIAQRNTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLCRGFNDAVNGFNDDGWSVLNCDGSEDVIIAVNSPKNLSSTSNPASSLTFVGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYCAASLKAGSYAYPGMRPTRFTGSQVIMPLGHTIEQEEMLEVIRLEGHSLAQEDAFVSKDIHLLQICSGIDENAVGAYSELIFASIDEMFPDDAPLVPSGFRVIPLDSKPGDKKDVLTRSRTLDLTSGLEVGPATNHATEDKSLCHNTRSVLTIAFQFPFDSNLQDSVAIMARQYVRSVISSVQRVAMAISPSGVNPAVGPKLSPGSPEALTLAHWICQSYSYYLGTELLRPDSLVGDSVLKHLWHHQDAILCCSLKSLPLFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCAEFGTLMEQGFAYLPAGICMSTMGRHVSFDQAIAWKVLAAENDTVHCLAFSFVNWSFV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1697 842 SUPERFAMILY Bet v1-like 162 374 - -
Glsi14g1697 842 CDD bZIP 76 115 - -
Glsi14g1697 842 FunFam Homeobox-leucine zipper protein REVOLUTA 24 79 - -
Glsi14g1697 842 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Glsi14g1697 842 SMART START_1 162 372 IPR002913 GO:0008289
Glsi14g1697 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 20 842 IPR044830 GO:0003700
Glsi14g1697 842 SMART HOX_1 21 87 IPR001356 GO:0003677
Glsi14g1697 842 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Glsi14g1697 842 Pfam START domain 163 370 IPR002913 GO:0008289
Glsi14g1697 842 Gene3D - 198 377 IPR023393 -
Glsi14g1697 842 Pfam MEKHLA domain 698 841 IPR013978 -
Glsi14g1697 842 Gene3D - 17 90 - -
Glsi14g1697 842 SUPERFAMILY Homeodomain-like 22 85 IPR009057 -
Glsi14g1697 842 Coils Coil 93 120 - -
Glsi14g1697 842 CDD homeodomain 24 84 IPR001356 GO:0003677
Glsi14g1697 842 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Glsi14g1697 842 CDD START_ArGLABRA2_like 157 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1697 Glsi-ChrGlsi14 17367595 17373464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1697 1 842 Homeobox Transcription Factor Family AT5G60690 81.250 0.0 1434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Glsi14g1697 START 2.1e-45 CL0209