Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1681 ATGAGCAGTCTGAGGCCCGAATCGCATGTAGCACAGCAGATTCGGCGTTATAAGTTGAGAATCCAGAATAGTTCCCAGCATTTGGAAGATTTTCCTAACAATATTGAACAATTATCATTAAACCCGGGCTTAAACTCGGATCTTCTTCAAGTTAGGAATGTTAGAAATGCCAATATGCTTTATGAATCGGCTTTTTTTCCATCAGAGATGGTCAATTTTTCATCAGCTTCGGATCCTTTATCTGCCGCTCGTAGGAACACAATGGAGTGCCAGGATCTTGTTGCCGCTGGACCCAGTACTAGTAGACTAATGATGCCGCAGTATGTTTCGTTTCCTCATGCATCTGACCCATCGTCTAGCATTCATTCTTCCCCTACACAACAATGTGAGCCGCGGAACTTGGGCTATGATTGGATGGTAAATTATGGAAATAGTTCTGTGGTTAATGAAAGCAATCCTAACTCTAATTTTGCTGCGCAACTGGACAATAATGTGTCTGCTTATCAACTCTTGGTGAAGCCTAGTTACAACGAACTCAGGGAAATACAGGGATCTTTAAGCAATCCCTCCGGGGAAGCGCATCATGCTGCATCTCCACTATATCAGAATACTTTGCAGGATATTGTGAAGTCAGCTTCTATCATGCAGCAAACTGGGCATGGAATTTGGATGGGGAATGGTAATGAATCAGATCAGCTATTTTTTGGAAATGCTAATTTGTGGACAAATCGAACATCTGACAATTTTCATGGTTGGAATAGCCCACTGAGTTTCTCAGTGAAAAAGAGCGAGGAAGACTCGGGGCCTGTCTTGAGTGATTCCAATCCTCAGGGATTATCTTTATCCCTTTCATCAAGTGCACAGCCCAAGCTTTGTAATTTTCAGTTTGGGGAGGGGTGTGGATCGGATGAACTTCATTCTAAATCTATGAAATCTATTTTGAAGCCCTCACTTCAAGACCTTGTGGGAATACCTTCAAACACTGGTTATCGAAATGTGGGACCCCTTGGCCCTTTCACTGGATATGCCACCATTTTAAAGAGTTCGAGATTCTTGAAGCCAGCGCAAGAGTTGCTGGATGAGTTCTGCAGGCTTTCTGGTCCAAACATTTTCAAAGCATGTGATGTTTCTGATAGGCTTTCTCGAGAGGTCAGTGCTTCTACTTCTGTAGAAGCTTTAAATGCGACTGAAAGTGGGGTTAGTGCAAAGGACAGTAATGCAGGCGCTGCTTCGTCTTCTATTTTCTTTAGTCCAAAAGAAAATAGCTGTGATGGAGCCAGAGGAAGTTTTTCCTTTTCCTCTCCGCCGGAGTATCAACAAAAAAAGGCCAAGCTCCTGTACATGCAAGAGGAGGTTATCAGAAGATACAAGCAATATCATCAACAAATGCAAATGGTTTTTTCATCTTTTGAGTCAGTAGTGGGTCTTAGTTCTGCTACTCCTTACATCACTATGGCTCTTAAGTCAGTATCAAGACACTTCAGGTGCCTAAAAAATGCTATCTTAGATCAGATCAAGCATATAAGAGAAATCTTGGGTGAAGAATTTGCAGGATCCACCTCTGGTACAAGTAGTAAACTTAACACTAATATGGCAAGGCTAAGGTGTTTGGACCAAAGCCTTCAAAAGAACAAATCTGGTGGGAGTGACACCGGCGTCTGGAGGCATCAGAGAGGGTTGCCAGAACGTTCAGTGGCAATTCTTAAAGCATGGTTATTTGAGCATTTCCTTCACCCGTATCCCACGGACACTGATAAACACATGTTGGCTACTCAAACAGGTCTATCCCGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAGAGGCTCAACGGGTGCTAATCAGAACTCTGGTAAGAATGGCGCAGAAGGTAGCAGCCAAGCTGTAGTTGATCAACCTCGGAACATGTTTGGTAAGCATGCAAATGCAATCCCTGAGAAGCAATTCCAGTGTTTGGAAATGGGTTCGGAGGTAGAACAATGGAATCAAGAGAAGCGGTCAAAATTGGAATGTGAGAGTACATCAAACATGGATGGGACATTAATGGGTTTTGTACCATACAGGCGTGGTGGGGTTGGACTTGGATCTGTGTCACTAACGTTGGGTCTTAGACAAGGCGTTGAAGGTGTACAACACCAGCAACAACAATTACAGCAGGAGGAGCAGCTTAGACGTCACTTTGGAGAGCATATGATCCATGACTTTGTGGGCTGA 2265 0.4349 MSSLRPESHVAQQIRRYKLRIQNSSQHLEDFPNNIEQLSLNPGLNSDLLQVRNVRNANMLYESAFFPSEMVNFSSASDPLSAARRNTMECQDLVAAGPSTSRLMMPQYVSFPHASDPSSSIHSSPTQQCEPRNLGYDWMVNYGNSSVVNESNPNSNFAAQLDNNVSAYQLLVKPSYNELREIQGSLSNPSGEAHHAASPLYQNTLQDIVKSASIMQQTGHGIWMGNGNESDQLFFGNANLWTNRTSDNFHGWNSPLSFSVKKSEEDSGPVLSDSNPQGLSLSLSSSAQPKLCNFQFGEGCGSDELHSKSMKSILKPSLQDLVGIPSNTGYRNVGPLGPFTGYATILKSSRFLKPAQELLDEFCRLSGPNIFKACDVSDRLSREVSASTSVEALNATESGVSAKDSNAGAASSSIFFSPKENSCDGARGSFSFSSPPEYQQKKAKLLYMQEEVIRRYKQYHQQMQMVFSSFESVVGLSSATPYITMALKSVSRHFRCLKNAILDQIKHIREILGEEFAGSTSGTSSKLNTNMARLRCLDQSLQKNKSGGSDTGVWRHQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETRGSTGANQNSGKNGAEGSSQAVVDQPRNMFGKHANAIPEKQFQCLEMGSEVEQWNQEKRSKLECESTSNMDGTLMGFVPYRRGGVGLGSVSLTLGLRQGVEGVQHQQQQLQQEEQLRRHFGEHMIHDFVG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1681 754 ProSiteProfiles 'Homeobox' domain profile. 551 614 IPR001356 GO:0003677
Glsi14g1681 754 SMART HOX_1 554 618 IPR001356 GO:0003677
Glsi14g1681 754 SUPERFAMILY Homeodomain-like 558 622 IPR009057 -
Glsi14g1681 754 Pfam Associated with HOX 345 501 IPR006563 -
Glsi14g1681 754 Gene3D - 557 619 - -
Glsi14g1681 754 Pfam Homeobox KN domain 571 610 IPR008422 GO:0003677|GO:0006355
Glsi14g1681 754 CDD homeodomain 554 615 IPR001356 GO:0003677
Glsi14g1681 754 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 211 639 - -
Glsi14g1681 754 SMART prehox3 340 503 IPR006563 -
Glsi14g1681 754 FunFam BEL1-like homeodomain protein 9 557 619 - -
Glsi14g1681 754 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1681 Glsi-ChrGlsi14 17154773 17159914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1681 267 624 Homeobox Transcription Factor Family AT5G02030 43.968 1.15e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Glsi14g1681 POX 2.4e-42 No_clan