Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1672 ATGGCTGATATTGAGGAATCCGCAGCTGGAAGCTCCATGCATGGAGTTACAGGCAGAGAGCAAACCTTCGTATCTTCAGTTGCTTCCCCAATTGTCCCAACTGATACCACAGCCAAATTTGCTCTCCCAGTTGATTCGGAGCACAAAGCCAAAGTGTTCAAACTCTTCTCCTTTGCCAAACCCCACATGACAACCTTCCACCTATCTTGGATTTCCTTCTTCACTTGCTTTGTTTCAACCTTCGCCGCAGCTCCTCTTGTTCCCATCATTCGTGACAACCTTAATCTCACAAAATATGACATTGGCAACGCTGGGGTTGCTTCGGTCTCAGGAAGTATCTTCTCTAGGCTTGTGATGGGTGCTGTTTGTGACATGTTAGGCCCACGTTACGGCTGCGCCTTCCTTATTATGCTTTCAGCCCCAGCTGTGTTCTGCATGTCATTTGTGAAAGATGCTGCTGGATATATAGCAGTTCGGTTCTTGATTGGGTTCTCCTTGGCCACTTTCGTTTCATGCCAATACTGGATGAGCACCATGTTTAACAGTAAGATTGTTGGGCTGGCCAATGGGACAGCAGCTGGGTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAATTGATCCGACGAACTGGATCCACTCCCTTCACTGCCTGGAGGATCGCCTTCTTCATCCCAGGTTGGTTGCATGTGATCATGGGGATCCTGGTCTTAACCCTTGGCCAAGACTTGCCTGATGGAAACCTTGGTGCCTTACAGAAGAAGGGTGATGTCGCCAAAGACAAGTTCTCCAAGTTGCTTTGGTATGCTATAACAAATTACAGGACATGGATTTTTGTTCTTCTGTACGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTTTGATAGGTTTGATCTGAAACTGCATACTGCTGGAATCATTGCTGCTTCGTTTGGAATGGCTAACATTGTTGCGCGTCCCTTTGGTGGATATGCTTCTGATTTTGCTGCTCGGTTATACGGCATGAGAGGCAGGCTGTGGACCCTCTGGATTCTTCAAACGTTAGGAGGGGCTTTCTGTATATGGCTTGGGCGTGCCAATTCGCTTCCTGTTGCTATCTTGGCAATGATTCTCTTCTCTATTGGAGCTCAAGCTGCTTGTGGTGCAACTTTTGGGATAATCCCATTCATTTCAAGGCGGTCTCTGGGGATTATATCAGGTCTGACTGGTGCAGGTGGAAACTTCGGGTCTGGGTTGACCCAGTTGATTTTCTTTTCAACCTCAAAATACTCCACTTCTACAGGTCTGTCCTTGATGGGTGTCATGATTGTATGCTGCACTCTTCCCGTCACTCTGGTTCACTTCCCACAGTGGGGTGGCATGTTCTTTCCTCCTTCAAAAGACGCTCACAAATCAACTGAAGAATACTATTACGCATCTGAATGGAACGAAGAGGAGAAGAACAGGGGCTTGCACCAGCCAAGTCTCAAGTTTGCAGAGAATAGCCGCTCTGAGAGAGGCAAGCGTGTGGCCTCTGCCCCAACTCCCCCCCATGTCTGA 1581 0.4794 MADIEESAAGSSMHGVTGREQTFVSSVASPIVPTDTTAKFALPVDSEHKAKVFKLFSFAKPHMTTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDIGNAGVASVSGSIFSRLVMGAVCDMLGPRYGCAFLIMLSAPAVFCMSFVKDAAGYIAVRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIRRTGSTPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKLLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFDLKLHTAGIIAASFGMANIVARPFGGYASDFAARLYGMRGRLWTLWILQTLGGAFCIWLGRANSLPVAILAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSKYSTSTGLSLMGVMIVCCTLPVTLVHFPQWGGMFFPPSKDAHKSTEEYYYASEWNEEEKNRGLHQPSLKFAENSRSERGKRVASAPTPPHV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1672 526 FunFam High affinity nitrate transporter 58 255 - -
Glsi14g1672 526 FunFam Nitrate transporter 2.1 266 467 - -
Glsi14g1672 526 SUPERFAMILY MFS general substrate transporter 57 460 IPR036259 -
Glsi14g1672 526 CDD MFS_NRT2_like 66 459 IPR044772 GO:0015112
Glsi14g1672 526 Gene3D MFS general substrate transporter like domains 265 466 IPR036259 -
Glsi14g1672 526 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 6 517 IPR044772 GO:0015112
Glsi14g1672 526 Pfam Major Facilitator Superfamily 70 426 IPR011701 GO:0022857|GO:0055085
Glsi14g1672 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 65 459 IPR020846 GO:0022857
Glsi14g1672 526 MobiDBLite consensus disorder prediction 492 514 - -
Glsi14g1672 526 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Glsi14g1672 526 MobiDBLite consensus disorder prediction 492 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1672 Glsi-ChrGlsi14 17049096 17050864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1672 10 524 Inorganic Solute Cotransporters AT5G60770 80.777 0.0 883