Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1663 ATGGGCCGGGTTCAGACATGCATTGGGAAACTGTTTTGTTTCGACCCAAATTTTAATGTTTCTGATCCAGCTAAAGGCCATGTTGTATTAAAGTTTCTGATCCACCGCTTTGGAGAAATGTGGTCGACACAAAATTGGTCACAGACTGACAGACAGAGATTCGGATACGCAGCCATAGTGCTCCCTTCTCCAAGATTAAGCATGGTGTCAGACGCAAGTAAAAAGAAAGCAGCACAGAAGAAGGTTGCTGCTGCTGCTAAGAGAGGAGGGAAGGCTGCTGCTGCTGCTGCTTCGTCAAAAGCGGCGTCATCGGAGGCTCAGAAGGCTGCCGATAAGCTAGCCAACGGAATTGGGGATATTCAGATTTCCGATCGGACTTGCACTGGCGTCCTCTGCTCGCATCCTCTTTCTAGGGATATTCGGATAGAGTCTCTATCAGTTACTTTCCATGGACATGATCTCATAGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGCTATGGTTTGCTTGGATTAAATGGTTGTGGAAAATCTACTCTCCTTACAGCAATAGGTTGTCGTGAGCTTCCAATTCCTGATCACATGGATATTTATCACCTTACCAGAGAAATTGAAGCTTCTGACATGTCTGCATTGGAGGCTGTAATAAACTGTGATGATGAAAGGTTGAAATTGGAGAAAGAAGCTGAAGCTTTGGCAGCACAGGAAGATGGAGGTGGTGAAAGTCTTGAACGTATTTATGAACGATTGGAAGCCATAGATGCGTCAACTGCAGAGAAGCGTGCTGCTGAAATTTTATATGGTCTTGGTTTTAACAAGCAGATGCAAGCAAAGAAGACACGCGACTTTTCTGGCGGTTGGAGAATGAGGATAGCATTAGCACGGGCTCTATTTATGAACCCAACAATTCTTCTACTTGATGAACCAACCAATCACCTAGATTTGGAAGCATGTGTGTGGCTGGAGGAGAATTTGAAAAGGTTCGACCGCATACTGGTTGTCATTTCACACTCCCAGGATTTCCTTAATGGTGTCTGCACAAACATCATCCACATGCAAAACAAGAAGTTGAAGCTCTACTCTGGTAACTATGATCAGTATGTTCAAACGCGTGCTGAACTGGAAGAAAACCAGATGAAGCAGTACAAGTGGGAACAGGAGCAGATTTCTTCAATGAAGGAATATATTGCCCGATTTGGGCATGGATCGGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACACTGGCAAAAATGGAACGGGGTGGACTTACTGAGAAGGTTGTTAAAGACAAAGTTTTGGTATTCCGCTTTGTTGATGTGGGAAAGCTTCCTCCTCCTGTTCTTCAGTTCGTTGAGGTGACATTTGGTTACACCCCAGATAATCTTCTGTACAGAAACCTTGACTTTGGGGTTGACTTAGACTCTAGGATTGCACTGGTTGGACCCAATGGAGCTGGGAAGAGTACACTACTGAAGCTAATGACTGGGGATCTGGCTCCTATTGATGGCATGGTCCGACGGCATAACCACCTTCGCATTGCACAATTTCATCAGCACTTGGCTGAAAAGCTAGACTTGGAAATGTCTGCCCTGCAGTTTATGATGAAAGAGTACCCTGGAAATGAGGAAGAGAAAATGAGGGCTGCTATTGGGAAGTTTGGACTGTCAGGCAAAGCCCAGGTGATGCCTATGAAGAATCTGTCTGATGGTCAGAGTAGCCGTGTGATTTTTGCATGGTTAGCTTGGAAGCAGCCTCACTTGCTGCTTTTGGATGAGCCAACTAACCATTTGGATATTGAGACAATTGACTCGTTGGCTGAGGCATTGAATGAATGGGATGGTGGCATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTGTGTGCAGAACAAACTTTGACCAGATGGGATGGTGATATTATGGATTTCAAGGAGCATCTAAGGTCAAAGGCAGGTTTATGTGACTGA 2001 0.4488 MGRVQTCIGKLFCFDPNFNVSDPAKGHVVLKFLIHRFGEMWSTQNWSQTDRQRFGYAAIVLPSPRLSMVSDASKKKAAQKKVAAAAKRGGKAAAAAASSKAASSEAQKAADKLANGIGDIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLTREIEASDMSALEAVINCDDERLKLEKEAEALAAQEDGGGESLERIYERLEAIDASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKRFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYSGNYDQYVQTRAELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLLYRNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLAPIDGMVRRHNHLRIAQFHQHLAEKLDLEMSALQFMMKEYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQSSRVIFAWLAWKQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCAEQTLTRWDGDIMDFKEHLRSKAGLCD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1663 666 FunFam Abc transporter f family member 1 140 404 - -
Glsi14g1663 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 385 IPR027417 -
Glsi14g1663 666 Pfam ABC transporter 158 312 IPR003439 GO:0005524
Glsi14g1663 666 CDD ABCF_EF-3 140 357 - -
Glsi14g1663 666 SMART AAA_5 164 366 IPR003593 GO:0016887
Glsi14g1663 666 SMART AAA_5 476 642 IPR003593 GO:0016887
Glsi14g1663 666 Pfam ABC transporter 351 427 IPR032781 -
Glsi14g1663 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 645 IPR027417 -
Glsi14g1663 666 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 81 661 - -
Glsi14g1663 666 Coils Coil 358 378 - -
Glsi14g1663 666 Pfam ABC transporter 468 598 IPR003439 GO:0005524
Glsi14g1663 666 Gene3D - 140 404 IPR027417 -
Glsi14g1663 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 380 IPR003439 GO:0005524
Glsi14g1663 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 451 666 IPR003439 GO:0005524
Glsi14g1663 666 Gene3D - 418 663 IPR027417 -
Glsi14g1663 666 FunFam ATP-binding cassette sub-family F member 3 411 664 - -
Glsi14g1663 666 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524|GO:0016887
Glsi14g1663 666 CDD ABCF_EF-3 451 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1663 Glsi-ChrGlsi14 16992014 16995824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1663 271 338 Calmodulin-binding Proteins AT2G36910 44.286 1.83e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1663 14 16992014 16995824 Glsi14g1663 14 16992014 16995824 ECH