Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1611 ATGGAGATGAATGTCGCTCGTGGCATGGATGGGACCTTGCTTTGTTGTGATGGATGTCCCTCTGCATATCATTCAAGGTGTATTGGTGTGATGAAAATGCTTATACCAGAAGGGCAACAACCATGGTATTGTCCAGAGTGCAAAATTAATATGACTGGGCCAATGATTGCAAAGGAAGCATCACTTAGAGGGGCTAAAATATTTGGAAAGGATTTGTATGGACAACTTTTCATGGGTACTTGTGATCCCTTATTGGTGTTCAATGACAATTGTGAATATTGTCTTAGATATTACAATCAGAATGACATTCCAAAAGTTCTCCAATTTCTTTATGCATCCATGCAGCATAGACCTATATACTATGAGGATTCTAGGTCAGAGAGTCATGTGTCAGACAATCAGAAGAAAGTTATATTTGGAAACAATTATTTGCAAGCAAAAGCATTCTCCTTAACAGTTTCACGCTTCTTTTGGCCAAGTTTTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGGAGGAAAGTTTATGTGGTCTGATAGTTGGATCCTTTCTAAGTGCAAGCTATAGAAAGCAATGGCGTACAAGAGTGGAACATGCCACAACATTTGGTGCTCTAAAGCTGCTTTTTCTTGAAAGCAGACAATTAGTTTGTAGAGCTGCAGTTCAAATGAGTAGGAATACATCACAACTTGCACTTCAGGTATTGCCATTACCTGATTACTCTGTTATATGGGATTTCCCCCTTCCCCCCCTTTCCTCCCATCTTACACACCTATTCTCTCTAAAATCATTATCCTTCTCTGATGCGGTTTCAGGAATGGTCCCAAAAGCAACAAAGGATACTCGTCCTGACTTGAAACAAGGTGCTTCTGATTCCACTTTGGCAACAAAAAGCCGTTGCAGTAATTGTTCTCGGGGTATTATATGGAAAAAGAAGAATGTTGAAAATACTGGCACTGATTTCAGGCTTAATAATATACTTTTAAAGGGAGGCTCCAAGATGCATGAATGCAATAAGCCACACACGAGGGCTTTAAAGAAAGAGCATTCTGGAGTGCGTTCTGATACTGGAACTCTTTCCGAATTGAAAGAGTGTGAGCCTGCTACCCCCGTCTTTCCCATAGAGGATGAGCCCAGACAACACAGTGATCCTCTGCTTCTCCCTCTTTCAAGTGTTGAGCTAATTAGAGAACCAAAGATAGAAGTGAATGTTGAGTTGAATGCTGTCTCTGGTCCAGGGCTTCAAAAACTACCTCTGGGAAGGGAGGTTAAGCGTGAGGGGGAAGGTTGTGGTTCTTTAGAAAGTAAACTTACGCATGCTGAGTTTTTAACACACAATGAAACAAGTACTCTTTCCAAACCTGCAGAGAAGGCATCATCTCCTTCTGTAGAATATGATGCATCTGGGAAGTTATCAGAAAATTTGGAAAATTCTTGTGCATTGGAAGGTGTTCCTAAAGAATGTGGAACTGTTAGTTTAGTTGATAAGTTGAAACCTGGAAATTCCTTACAAGGCAGTGTTTATAATTGTTGTCAATGTTTGCAGGTGGAACCAGCGCCTGATCTATCTTGTGAGATTTGTGGGCTTTGGATTCTCGGCCAATGCTCACCGTGGGCTGAATCACCATCTAGATTAGAAACCTGGAGGTGCAGACATGGCAGTTTTAGCAGCAATCATGCACGCTGGCTCAATGGATGGTTTGTTAATTGGTTGCAAGTATCACACCATGGGCAAGTTGAATCCATAGCTTTGGAGCTTGGGGTGATTGCCTGTAGTGTGCGCCTTCAGAGGTTGATTGGTGTCTCCAGTGTTGCTATGGTTTCTTTGCTTTAA 1845 0.4184 MEMNVARGMDGTLLCCDGCPSAYHSRCIGVMKMLIPEGQQPWYCPECKINMTGPMIAKEASLRGAKIFGKDLYGQLFMGTCDPLLVFNDNCEYCLRYYNQNDIPKVLQFLYASMQHRPIYYEDSRSESHVSDNQKKVIFGNNYLQAKAFSLTVSRFFWPSFEKKLVEVPRERCGWEESLCGLIVGSFLSASYRKQWRTRVEHATTFGALKLLFLESRQLVCRAAVQMSRNTSQLALQVLPLPDYSVIWDFPLPPLSSHLTHLFSLKSLSFSDAVSGMVPKATKDTRPDLKQGASDSTLATKSRCSNCSRGIIWKKKNVENTGTDFRLNNILLKGGSKMHECNKPHTRALKKEHSGVRSDTGTLSELKECEPATPVFPIEDEPRQHSDPLLLPLSSVELIREPKIEVNVELNAVSGPGLQKLPLGREVKREGEGCGSLESKLTHAEFLTHNETSTLSKPAEKASSPSVEYDASGKLSENLENSCALEGVPKECGTVSLVDKLKPGNSLQGSVYNCCQCLQVEPAPDLSCEICGLWILGQCSPWAESPSRLETWRCRHGSFSSNHARWLNGWFVNWLQVSHHGQVESIALELGVIACSVRLQRLIGVSSVAMVSLL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1611 614 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 52 IPR013083 -
Glsi14g1611 614 Pfam PHD-finger 10 48 IPR019787 -
Glsi14g1611 614 PANTHER PHD FINGER FAMILY PROTEIN 8 215 - -
Glsi14g1611 614 SUPERFAMILY FYVE/PHD zinc finger 10 55 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1611 Glsi-ChrGlsi14 16491759 16502955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1611 350 554 PHD Transcription Factor Family AT5G35210 30.252 1.44e-16 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Glsi14g1611 PHD 2.8e-08 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1611 14 16491759 16502955 Glsi14g1611 14 16491759 16502955 ECH