Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1590 ATGGCAGTGATCTGCGATGAAAAGTTGGAGGAGAAGCTTCGCGTCATCGTGTTGGCTCATTTCGGTGGCCGAGATCGTTGCGGTGGTCAAGATCAAGGTGTGGTGGTGGCCGTGGTGGCCGTCGCGTCTCCTTCTGGCTCTGGACTCCCTTTCGATGGAGGTCTGCTGGAAGACAAGGAAGTAATAACGTTGTTTTTTCTCACCTTCTATATCTGTGTTATGGACTTTGAGAATGAACCTCGATTTCCTTCTACATCTCACAAGAAGAAAGCAGGAAGAAGAAAGTTCCAAGAGACACGCCACCCCGTCTACAGGGGTGTCCGCCGAAGAAACGGCAACAAATGGGTTTGTGAAGTCCGGGAACCCAACAAAAAGTCTAGGATATGGTTAGGGACTTACCCTACCCCCGAAATGGCTGCTAGGGCACATGATGTGGCTGCACTAACCCTTAGAGGCACCTCAGCCCTCCTAAACTTTCCTGATTCGGCTGCTCTTCTTCCAGTGGCGAGCTCATCTTCAGCTAAAGATATAAGATGCGCTGCCGCCAAAGCTGCTAGGGCTATAGGAGTACCCGCTACATCTGCACCCTCATCTTCTAAGAACACTTCTTTAGTAGATCAGGAGAAGTGCCAAGAATTCCAGAGCATGGGTGATATCAGCACTGCTGCTTCCGAGAGAAACAACAACGATGAGTCTAATAACGCATTGTTCTTGGACGAGGAGGCATTGTATAATATGCCAGGACTGTTAGATAGTATGGCCGAGGGTTTGCTTCTTACCCCACCTTCTATGAAGAGAGCATTAGATTGGGATTGGGACAATAATGCTTATGACAAAGACTTGACATTATGGAGAGATTAA 861 0.4832 MAVICDEKLEEKLRVIVLAHFGGRDRCGGQDQGVVVAVVAVASPSGSGLPFDGGLLEDKEVITLFFLTFYICVMDFENEPRFPSTSHKKKAGRRKFQETRHPVYRGVRRRNGNKWVCEVREPNKKSRIWLGTYPTPEMAARAHDVAALTLRGTSALLNFPDSAALLPVASSSSAKDIRCAAAKAARAIGVPATSAPSSSKNTSLVDQEKCQEFQSMGDISTAASERNNNDESNNALFLDEEALYNMPGLLDSMAEGLLLTPPSMKRALDWDWDNNAYDKDLTLWRD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1590 286 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Glsi14g1590 286 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Glsi14g1590 286 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 81 285 IPR045277 GO:0003700
Glsi14g1590 286 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Glsi14g1590 286 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
Glsi14g1590 286 SUPERFAMILY DNA-binding domain 103 162 IPR016177 GO:0003677
Glsi14g1590 286 CDD AP2 104 162 IPR001471 GO:0003700|GO:0006355
Glsi14g1590 286 FunFam Ethylene-responsive transcription factor 2 102 161 - -
Glsi14g1590 286 Gene3D AP2/ERF domain 103 161 IPR036955 GO:0003700|GO:0006355
Glsi14g1590 286 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1590 Glsi-ChrGlsi14 16379679 16382392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1590 77 284 AP2-EREBP Transcription Factor Family AT5G51990 46.667 2.25e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi14g1590 AP2 1e-14 CL0081