Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1589 ATGGATGACCGTGCAACTGACACCATCGCTGAGATGCAAAGACCTTCAAACCCTAGTAATGGAGGACAAGAAAAGAAGCCGAAGGTGGTGGTGATAATGGGTCCCACTGGTTCAGGGAAGTCCAAGCTTGCCATTGATTTGGCCTCCCACTTCCCGATTGAAGTTATCAATGCTGATTCCATGCAGGTCTACCGAGGCCTTGATGTTCTCACCAACAAAGTTCCACTCTCGGATCAAAAGGGGGTGCCGCATCATCTTCTGGGTACCATAAGTCCAAACGTGGAATTCACGGCTAAAGAGTTTCGGGATTCTGCTATTCCTCTTGTCAATGACATACTGGCTCGCAACTGCTTGCCTGTCATAGTTGGGGGTACGAATTATTACATCCAGGCTCTTGTGAGTCCATTCCTTCTAGACGATTCGGTAGGTGATATGAATAAAACCTGTTTGGGCGACCGTCCTGGGATTACACAGTTGGATAAGAGTTTCATCCCTGGAAAGGACTGTTCGATTAATCATTATGACCTGCTTAAAGATATAGATCCAGTTGCAGCAAATAGAATGCATCCAAATAATTATAGGAAGATTAGTCAGTACCTTAGTTTGTATGCTTGTTCCGGAGTTCTTCCTAGCACAGTTTTCCAAGGAAAGACTGCAGAGAAGTGGGGTCAAGTTGATAACTTACGATATGATTGCTGTTTTATATGTGTGGATGCTTCTCTTCCTGTACTGGACAGATATGTGGAACAGAGGGTAGATTGCATGATGGGTGCTGGATTACTTAATGAAGTCTATGACATTTACAATCTGAATGCAGATTATACTCGAGGCTTGCGGCAGGCCATTGGCGTCCATGAGTTTGAGCCTCTTCTAAGAACCTGTTTAATTGAAGGCATCTACAAAAGAGAGAAGGAATTGACTGAGGGTTCCAGCAGAGAAAAGGGTGTTAAGTTGTTTGATGATGATCTGAAGGAGCACTTGAATTCTTCTTCTGATACTAAATCTGTACTTCTTTTGGAGGAAGCAATTGAAAAAGTAAAGGTTAATACACGGAGACTTGTTCGTCGTCAGAAGAGGATGCTTAATCGACTGCAAACATTGTTTGATTGGAACATACACTATGTTGATTCCACGGAGTCATTATCAAGTAAATCAGATGATATATGGACTGCCCAAGTAGTTGAACCTGCCATGAAGATAGTAAGATCTTTCCTTTGTAAGAATGATAGTCTGTCATCCACATCTCAGATGTCAAATAGCACTGGAATGAAGATAACACAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGATTGCATGAATGGGAACAACACAAACAAGGTCGTGGGCACCGGAAACGTATTTCTAGTCTCAAGAACAAGTCAAGAGGCCTCAGTTTGGTGGAATAA 1434 0.4303 MDDRATDTIAEMQRPSNPSNGGQEKKPKVVVIMGPTGSGKSKLAIDLASHFPIEVINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTISPNVEFTAKEFRDSAIPLVNDILARNCLPVIVGGTNYYIQALVSPFLLDDSVGDMNKTCLGDRPGITQLDKSFIPGKDCSINHYDLLKDIDPVAANRMHPNNYRKISQYLSLYACSGVLPSTVFQGKTAEKWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMGAGLLNEVYDIYNLNADYTRGLRQAIGVHEFEPLLRTCLIEGIYKREKELTEGSSREKGVKLFDDDLKEHLNSSSDTKSVLLLEEAIEKVKVNTRRLVRRQKRMLNRLQTLFDWNIHYVDSTESLSSKSDDIWTAQVVEPAMKIVRSFLCKNDSLSSTSQMSNSTGMKITQRDLWTQYICKACGDRVLRGLHEWEQHKQGRGHRKRISSLKNKSRGLSLVE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1589 477 Gene3D - 27 430 IPR027417 -
Glsi14g1589 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 272 IPR027417 -
Glsi14g1589 477 Gene3D - 170 217 - -
Glsi14g1589 477 Gene3D Classic Zinc Finger 431 472 - -
Glsi14g1589 477 MobiDBLite consensus disorder prediction 1 27 - -
Glsi14g1589 477 FunFam tRNA dimethylallyltransferase 429 472 - -
Glsi14g1589 477 Pfam IPP transferase 62 359 - -
Glsi14g1589 477 Hamap tRNA dimethylallyltransferase [miaA]. 29 382 IPR018022 GO:0008033
Glsi14g1589 477 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 405 IPR039657 -
Glsi14g1589 477 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 29 293 IPR018022 GO:0008033
Glsi14g1589 477 MobiDBLite consensus disorder prediction 458 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1589 Glsi-ChrGlsi14 16366279 16369812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1589 17 468 C2H2 Transcription Factor Family AT2G27760 56.863 1.68e-178 506