Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi14g1586 | ATGTCGGCTGCCTTGGCCGGAGAGAGCATGTCGAGGCAATCCAGCAACGCAAGCCGGCGGTCGGGGAGTGTTAGAGAGATGTGGAATGAACCTGACGTGTTCCGGCGGGAATCCGGCAGGGTGGCGGATGACGAAGAAGAGTTGATGTGGGCGGCAATTGAGAGGCTACCGACTTATGATAGATTAAGGACAGGGATGCTGAACCACGTGACTGTGAGTGGGAGGCTGATTCATGATGAAATTGATATTACCAGACTTGAGCCTCGGGAGAAACAGCGTTTGATGGAAAGTGTTCTCAAGGCTGCAGAAGAAGACAATGAAAAGTTCCTCAAAAGGCTCAGGAACAGAATCGATATGGTGGGAATAGAGATTCCCAAAATTGAAGTCAGATATGAAAATTTGTCTATAGAAGGAGAAGCATTCGTGGGGACCAGAGCACTTCCAACTCTGATAAATTCCACCTTGAATGTAGTAGAGGGGACTCTTGGAAAAGTTGGTCTCTCTCCACCAAAGAAAAAAGTCATTAAGATACTTCATGATGTGAGCGGAATTGCGAAACCATCAAGGATGATTTTGCTTCTTGGACCTCCCGGGGCAGGAAAAACAACTCTTTTAAAGGCACTAGCAGGGAAACTTGATGAGGATCTAAAGATGACTGGGAGAATCACCTACTGTGGCCATGAATTTCATGAATTTATTCCTCAGAGAACAAGTGCTTATATTAGCCAGCATGATCTTCATCATGGCGAGATGACAGTTCGCGAGACATGTGATTTCTCCGGACGTTGTCTTGGAGTTGGAACCAGATATGATTTGCTTGCGGAGTTGTCCAGAAGAGAGAAACAAGCGGGAATCAAACCTGATGCTGAGATTGATGCGTTCATGAAAGCCGTATCTATGTCTGGCCAAAAAACTAGCTTGGCTACAGACTACGTTCTCAAGATTCTTGGTCTCGATATCTGTGCTGATATCATAGTTGGAGATCAAATGCAAAGGGGTATTTCCGGTGGGCAAAAGAAGCGTGTGACTACCGTTTCAGAGTTTGCTCAGGCCTTCAACTCTTTCCACGTTGGCGAACAGCTATTACAAGAACTGAAAACCCCTTATGATAAAACTAAAACCCATCCTGCAGCTTTGGTGAAGCAGAAAATTCCCATCTCCATTGGGGAATCATTGTTATGGGTCGTCCTTACGTATTATACAATGGGGTTTGCACCTGCTGCCAGCAGGTTTTTCAAACAGCTATTGGCATACATTGGCATACATCAAATGGCTCTTTCTCTCTTCCGATTCATTGCAGGTGCTAGTAGAGCAGAGGTTATTGCTAACACGTTTGGAATGTTTGCCCTGCTGCTTGTGTTTGTTCTTGGTGGATACATCATTTCAAAAGACGACATCCAATCATGGCTGATTTGGTGCTACTACATCTCTCCGATGATGTATGGACAAAATGCTCTTGCGATAAATGAGTTTCTGGATGGAAGATGGAGCACTCCTTCGACCAACACCAGCGAACCCACAGTTGGGAAGCAGCTTCTTAAATCTAGAGGCTTGTTTAGGACAGAAACATGGTACTGGATTTGTATTGGGGCACTCTTCGGGTTTTCTGTCCTTTTTAATGTGTTCTTCACTGCAACACTCACATATTTAAATCCATTTGGTGATAACAAACCTATGCTTTCGGAGGATGAGGGTGAGAGTGTTTCTCCGCGGCCGTCAGCATCCAATCCAGAAGGTACAGATATGCCGGTGAGAAATACCAGCTCCAATGGGAATGTTGTAAAAGGTGGAAAAAGAAGAGGAATGGTTCTGCCCTTCCAGCCCCTTTCACTAGCTTTCAACCATGTCAACTACTATGTGGATATGCCTGCAGAAATGAAGAGCCAAGGAGTTGAAGAGAGCCGGTTGCATCTGCTGAAAGACGTGAGTGGGGCTTTTAGGCCAGGTGTTCTGACAGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACCACCTTAATGGATGTCCTAGCAGGAAGAAAGACCGGTGGATATATTGAGGGTAGCATAATCATTTCTGGTTATCCTAAGAATCAGGAAACCTTTGCTCGGATCAGCGGATACTGTGAACAGAATGACATCCATTCACCATATGTTACTGTCTATGAATCTCTTGTGTACTCTGCCTGGCTACGTCTTTCCTCTGACGTAAACAAGGAAACACGGATGATGTTCGTCGATGAAGTTATGGAGTTGGTTGAACTGAACGCCATAAGAAATGCTCTAGTAGGGCTTCCTGGAGTGAATGGTCTTTCAACGGAGCAGAGAAAAAGGCTCACCATTGCGGTGGAGTTGGTTGCTAATCCCTCTATCATCTTCATGGATGAGCCCACATCAGGTCTTGATGCCAGAGCTGCTGCCATTGTTATGCGAACTGTAAGGAACACAGTGGACACAGGAAGAACTGTCGTCTGCACAATTCACCAACCAAGTATTGACATATTTGAAGCTTTTGATGAGCTATTTTTGTTGAAAAGAGGTGGACAAGTGACTTATGCTGGACCTCTTGGCCAGCGTTCTCACAAGCTTGTCGAATATTTTGAGGCTGTTCCAGGTGTTCCCAAGATTAAAGAGGGTTACAACCCCGCAACCTGGATGTTAGAGGTCAGCACCACTGGAGTTGAAAGTCAACTTGGTATTGATTTTGCAGAAGTTTATGCCAACTCCGAGCTCTATCAGAGAAATCAAGAACTTATAAAGCAGTTAAGCATTCCAGAACCAGGTTCTCAGGATCTTTACTTCCCCACCAAATACTCCCAGAATTTCGTTACTCAATGCAAGGCTTGTTTCTGGAAACAGTACTGGTCATACTGGAGGAATTCCAAATATAATGCCGTCCGATTCGCCATGGCATTTGTCATTGGCATTATATTTGGTGTAATTTTTTGGATGAAGGGGGACAAATTAGGAACCCAACAAGAGCTAACAAATCTATCCGGAGCCATCTTTTCTGCTATTCTCTTTCTTGGTGCTGCGAATGCTTCTTCTGTGCAGCCTGTGGTGTCAATAGAGAGAACTGTCTTCTACCGAGAAAGAGCAGCAGGGATGTATTCAGAAATGCCTTACGCGTTAGCCCAGGTATCTATTGAGACAATTTATGTGGCATTTCAAACCGCAGCGTACAATATTCTTCTTTACTCTATGATTGGATTCAAATGGGAAGCGGCAAAGTTCTTCTATTTCTATTACTTCATGTTCATGTGCTTCACCTATTTCACCTTGTTTGGGATGATGGTGGTCGCCTTGACTCCTGGCCTACAACTTTCAGCCATTCTTATGGCCTTCTTGTTTAACTTCTGGAACTTGTTCTCTGGTTTTATGATCCCCAGGCCGCTTATTCCCGTGTGTGGTCACGACTACAGGAGCTATCGCAAAGGTTTATTAAATACCATTAACAGTTGTTATGCACATGGTACTAGAGAAAATGGTGCAAAGATTAAAGTGAATGGAAGAGACATTTAA | 3498 | 0.4448 | MSAALAGESMSRQSSNASRRSGSVREMWNEPDVFRRESGRVADDEEELMWAAIERLPTYDRLRTGMLNHVTVSGRLIHDEIDITRLEPREKQRLMESVLKAAEEDNEKFLKRLRNRIDMVGIEIPKIEVRYENLSIEGEAFVGTRALPTLINSTLNVVEGTLGKVGLSPPKKKVIKILHDVSGIAKPSRMILLLGPPGAGKTTLLKALAGKLDEDLKMTGRITYCGHEFHEFIPQRTSAYISQHDLHHGEMTVRETCDFSGRCLGVGTRYDLLAELSRREKQAGIKPDAEIDAFMKAVSMSGQKTSLATDYVLKILGLDICADIIVGDQMQRGISGGQKKRVTTVSEFAQAFNSFHVGEQLLQELKTPYDKTKTHPAALVKQKIPISIGESLLWVVLTYYTMGFAPAASRFFKQLLAYIGIHQMALSLFRFIAGASRAEVIANTFGMFALLLVFVLGGYIISKDDIQSWLIWCYYISPMMYGQNALAINEFLDGRWSTPSTNTSEPTVGKQLLKSRGLFRTETWYWICIGALFGFSVLFNVFFTATLTYLNPFGDNKPMLSEDEGESVSPRPSASNPEGTDMPVRNTSSNGNVVKGGKRRGMVLPFQPLSLAFNHVNYYVDMPAEMKSQGVEESRLHLLKDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSIIISGYPKNQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLSSDVNKETRMMFVDEVMELVELNAIRNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQVTYAGPLGQRSHKLVEYFEAVPGVPKIKEGYNPATWMLEVSTTGVESQLGIDFAEVYANSELYQRNQELIKQLSIPEPGSQDLYFPTKYSQNFVTQCKACFWKQYWSYWRNSKYNAVRFAMAFVIGIIFGVIFWMKGDKLGTQQELTNLSGAIFSAILFLGAANASSVQPVVSIERTVFYRERAAGMYSEMPYALAQVSIETIYVAFQTAAYNILLYSMIGFKWEAAKFFYFYYFMFMCFTYFTLFGMMVVALTPGLQLSAILMAFLFNFWNLFSGFMIPRPLIPVCGHDYRSYRKGLLNTINSCYAHGTRENGAKIKVNGRDI | 1165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi14g1586 | 1165 | MobiDBLite | consensus disorder prediction | 560 | 596 | - | - | |
Glsi14g1586 | 1165 | Gene3D | - | 161 | 354 | IPR027417 | - | |
Glsi14g1586 | 1165 | MobiDBLite | consensus disorder prediction | 568 | 594 | - | - | |
Glsi14g1586 | 1165 | Pfam | ABC-2 type transporter | 936 | 1126 | IPR013525 | GO:0016020|GO:0140359 | |
Glsi14g1586 | 1165 | Pfam | ABC-2 type transporter | 364 | 491 | IPR013525 | GO:0016020|GO:0140359 | |
Glsi14g1586 | 1165 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 9 | 344 | - | - | |
Glsi14g1586 | 1165 | FunFam | ABC transporter G family member 34 | 164 | 370 | - | - | |
Glsi14g1586 | 1165 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 635 | 847 | IPR027417 | - | |
Glsi14g1586 | 1165 | Pfam | ABC-2 type transporter | 820 | 881 | IPR043926 | GO:0140359 | |
Glsi14g1586 | 1165 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Glsi14g1586 | 1165 | FunFam | ABC transporter G family member 40 | 625 | 855 | - | - | |
Glsi14g1586 | 1165 | Pfam | ABC transporter | 178 | 343 | IPR003439 | GO:0005524 | |
Glsi14g1586 | 1165 | Pfam | ABC transporter | 639 | 791 | IPR003439 | GO:0005524 | |
Glsi14g1586 | 1165 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 611 | 863 | IPR003439 | GO:0005524 | |
Glsi14g1586 | 1165 | CDD | ABCG_PDR_domain2 | 608 | 846 | IPR034003 | - | |
Glsi14g1586 | 1165 | SMART | AAA_5 | 187 | 422 | IPR003593 | GO:0016887 | |
Glsi14g1586 | 1165 | SMART | AAA_5 | 648 | 840 | IPR003593 | GO:0016887 | |
Glsi14g1586 | 1165 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Glsi14g1586 | 1165 | Gene3D | - | 625 | 860 | IPR027417 | - | |
Glsi14g1586 | 1165 | Pfam | Plant PDR ABC transporter associated | 496 | 558 | IPR013581 | - | |
Glsi14g1586 | 1165 | Pfam | ABC-transporter N-terminal | 92 | 152 | IPR029481 | - | |
Glsi14g1586 | 1165 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 349 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi14g1586 | Glsi-ChrGlsi14 | 16346428 | 16352839 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi14g1586 | 636 | 823 | Calmodulin-binding Proteins | AT2G36910 | 25.773 | 6.54e-06 | 48.9 |