Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1586 ATGTCGGCTGCCTTGGCCGGAGAGAGCATGTCGAGGCAATCCAGCAACGCAAGCCGGCGGTCGGGGAGTGTTAGAGAGATGTGGAATGAACCTGACGTGTTCCGGCGGGAATCCGGCAGGGTGGCGGATGACGAAGAAGAGTTGATGTGGGCGGCAATTGAGAGGCTACCGACTTATGATAGATTAAGGACAGGGATGCTGAACCACGTGACTGTGAGTGGGAGGCTGATTCATGATGAAATTGATATTACCAGACTTGAGCCTCGGGAGAAACAGCGTTTGATGGAAAGTGTTCTCAAGGCTGCAGAAGAAGACAATGAAAAGTTCCTCAAAAGGCTCAGGAACAGAATCGATATGGTGGGAATAGAGATTCCCAAAATTGAAGTCAGATATGAAAATTTGTCTATAGAAGGAGAAGCATTCGTGGGGACCAGAGCACTTCCAACTCTGATAAATTCCACCTTGAATGTAGTAGAGGGGACTCTTGGAAAAGTTGGTCTCTCTCCACCAAAGAAAAAAGTCATTAAGATACTTCATGATGTGAGCGGAATTGCGAAACCATCAAGGATGATTTTGCTTCTTGGACCTCCCGGGGCAGGAAAAACAACTCTTTTAAAGGCACTAGCAGGGAAACTTGATGAGGATCTAAAGATGACTGGGAGAATCACCTACTGTGGCCATGAATTTCATGAATTTATTCCTCAGAGAACAAGTGCTTATATTAGCCAGCATGATCTTCATCATGGCGAGATGACAGTTCGCGAGACATGTGATTTCTCCGGACGTTGTCTTGGAGTTGGAACCAGATATGATTTGCTTGCGGAGTTGTCCAGAAGAGAGAAACAAGCGGGAATCAAACCTGATGCTGAGATTGATGCGTTCATGAAAGCCGTATCTATGTCTGGCCAAAAAACTAGCTTGGCTACAGACTACGTTCTCAAGATTCTTGGTCTCGATATCTGTGCTGATATCATAGTTGGAGATCAAATGCAAAGGGGTATTTCCGGTGGGCAAAAGAAGCGTGTGACTACCGTTTCAGAGTTTGCTCAGGCCTTCAACTCTTTCCACGTTGGCGAACAGCTATTACAAGAACTGAAAACCCCTTATGATAAAACTAAAACCCATCCTGCAGCTTTGGTGAAGCAGAAAATTCCCATCTCCATTGGGGAATCATTGTTATGGGTCGTCCTTACGTATTATACAATGGGGTTTGCACCTGCTGCCAGCAGGTTTTTCAAACAGCTATTGGCATACATTGGCATACATCAAATGGCTCTTTCTCTCTTCCGATTCATTGCAGGTGCTAGTAGAGCAGAGGTTATTGCTAACACGTTTGGAATGTTTGCCCTGCTGCTTGTGTTTGTTCTTGGTGGATACATCATTTCAAAAGACGACATCCAATCATGGCTGATTTGGTGCTACTACATCTCTCCGATGATGTATGGACAAAATGCTCTTGCGATAAATGAGTTTCTGGATGGAAGATGGAGCACTCCTTCGACCAACACCAGCGAACCCACAGTTGGGAAGCAGCTTCTTAAATCTAGAGGCTTGTTTAGGACAGAAACATGGTACTGGATTTGTATTGGGGCACTCTTCGGGTTTTCTGTCCTTTTTAATGTGTTCTTCACTGCAACACTCACATATTTAAATCCATTTGGTGATAACAAACCTATGCTTTCGGAGGATGAGGGTGAGAGTGTTTCTCCGCGGCCGTCAGCATCCAATCCAGAAGGTACAGATATGCCGGTGAGAAATACCAGCTCCAATGGGAATGTTGTAAAAGGTGGAAAAAGAAGAGGAATGGTTCTGCCCTTCCAGCCCCTTTCACTAGCTTTCAACCATGTCAACTACTATGTGGATATGCCTGCAGAAATGAAGAGCCAAGGAGTTGAAGAGAGCCGGTTGCATCTGCTGAAAGACGTGAGTGGGGCTTTTAGGCCAGGTGTTCTGACAGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACCACCTTAATGGATGTCCTAGCAGGAAGAAAGACCGGTGGATATATTGAGGGTAGCATAATCATTTCTGGTTATCCTAAGAATCAGGAAACCTTTGCTCGGATCAGCGGATACTGTGAACAGAATGACATCCATTCACCATATGTTACTGTCTATGAATCTCTTGTGTACTCTGCCTGGCTACGTCTTTCCTCTGACGTAAACAAGGAAACACGGATGATGTTCGTCGATGAAGTTATGGAGTTGGTTGAACTGAACGCCATAAGAAATGCTCTAGTAGGGCTTCCTGGAGTGAATGGTCTTTCAACGGAGCAGAGAAAAAGGCTCACCATTGCGGTGGAGTTGGTTGCTAATCCCTCTATCATCTTCATGGATGAGCCCACATCAGGTCTTGATGCCAGAGCTGCTGCCATTGTTATGCGAACTGTAAGGAACACAGTGGACACAGGAAGAACTGTCGTCTGCACAATTCACCAACCAAGTATTGACATATTTGAAGCTTTTGATGAGCTATTTTTGTTGAAAAGAGGTGGACAAGTGACTTATGCTGGACCTCTTGGCCAGCGTTCTCACAAGCTTGTCGAATATTTTGAGGCTGTTCCAGGTGTTCCCAAGATTAAAGAGGGTTACAACCCCGCAACCTGGATGTTAGAGGTCAGCACCACTGGAGTTGAAAGTCAACTTGGTATTGATTTTGCAGAAGTTTATGCCAACTCCGAGCTCTATCAGAGAAATCAAGAACTTATAAAGCAGTTAAGCATTCCAGAACCAGGTTCTCAGGATCTTTACTTCCCCACCAAATACTCCCAGAATTTCGTTACTCAATGCAAGGCTTGTTTCTGGAAACAGTACTGGTCATACTGGAGGAATTCCAAATATAATGCCGTCCGATTCGCCATGGCATTTGTCATTGGCATTATATTTGGTGTAATTTTTTGGATGAAGGGGGACAAATTAGGAACCCAACAAGAGCTAACAAATCTATCCGGAGCCATCTTTTCTGCTATTCTCTTTCTTGGTGCTGCGAATGCTTCTTCTGTGCAGCCTGTGGTGTCAATAGAGAGAACTGTCTTCTACCGAGAAAGAGCAGCAGGGATGTATTCAGAAATGCCTTACGCGTTAGCCCAGGTATCTATTGAGACAATTTATGTGGCATTTCAAACCGCAGCGTACAATATTCTTCTTTACTCTATGATTGGATTCAAATGGGAAGCGGCAAAGTTCTTCTATTTCTATTACTTCATGTTCATGTGCTTCACCTATTTCACCTTGTTTGGGATGATGGTGGTCGCCTTGACTCCTGGCCTACAACTTTCAGCCATTCTTATGGCCTTCTTGTTTAACTTCTGGAACTTGTTCTCTGGTTTTATGATCCCCAGGCCGCTTATTCCCGTGTGTGGTCACGACTACAGGAGCTATCGCAAAGGTTTATTAAATACCATTAACAGTTGTTATGCACATGGTACTAGAGAAAATGGTGCAAAGATTAAAGTGAATGGAAGAGACATTTAA 3498 0.4448 MSAALAGESMSRQSSNASRRSGSVREMWNEPDVFRRESGRVADDEEELMWAAIERLPTYDRLRTGMLNHVTVSGRLIHDEIDITRLEPREKQRLMESVLKAAEEDNEKFLKRLRNRIDMVGIEIPKIEVRYENLSIEGEAFVGTRALPTLINSTLNVVEGTLGKVGLSPPKKKVIKILHDVSGIAKPSRMILLLGPPGAGKTTLLKALAGKLDEDLKMTGRITYCGHEFHEFIPQRTSAYISQHDLHHGEMTVRETCDFSGRCLGVGTRYDLLAELSRREKQAGIKPDAEIDAFMKAVSMSGQKTSLATDYVLKILGLDICADIIVGDQMQRGISGGQKKRVTTVSEFAQAFNSFHVGEQLLQELKTPYDKTKTHPAALVKQKIPISIGESLLWVVLTYYTMGFAPAASRFFKQLLAYIGIHQMALSLFRFIAGASRAEVIANTFGMFALLLVFVLGGYIISKDDIQSWLIWCYYISPMMYGQNALAINEFLDGRWSTPSTNTSEPTVGKQLLKSRGLFRTETWYWICIGALFGFSVLFNVFFTATLTYLNPFGDNKPMLSEDEGESVSPRPSASNPEGTDMPVRNTSSNGNVVKGGKRRGMVLPFQPLSLAFNHVNYYVDMPAEMKSQGVEESRLHLLKDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSIIISGYPKNQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLSSDVNKETRMMFVDEVMELVELNAIRNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGQVTYAGPLGQRSHKLVEYFEAVPGVPKIKEGYNPATWMLEVSTTGVESQLGIDFAEVYANSELYQRNQELIKQLSIPEPGSQDLYFPTKYSQNFVTQCKACFWKQYWSYWRNSKYNAVRFAMAFVIGIIFGVIFWMKGDKLGTQQELTNLSGAIFSAILFLGAANASSVQPVVSIERTVFYRERAAGMYSEMPYALAQVSIETIYVAFQTAAYNILLYSMIGFKWEAAKFFYFYYFMFMCFTYFTLFGMMVVALTPGLQLSAILMAFLFNFWNLFSGFMIPRPLIPVCGHDYRSYRKGLLNTINSCYAHGTRENGAKIKVNGRDI 1165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1586 1165 MobiDBLite consensus disorder prediction 560 596 - -
Glsi14g1586 1165 Gene3D - 161 354 IPR027417 -
Glsi14g1586 1165 MobiDBLite consensus disorder prediction 568 594 - -
Glsi14g1586 1165 Pfam ABC-2 type transporter 936 1126 IPR013525 GO:0016020|GO:0140359
Glsi14g1586 1165 Pfam ABC-2 type transporter 364 491 IPR013525 GO:0016020|GO:0140359
Glsi14g1586 1165 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 9 344 - -
Glsi14g1586 1165 FunFam ABC transporter G family member 34 164 370 - -
Glsi14g1586 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 847 IPR027417 -
Glsi14g1586 1165 Pfam ABC-2 type transporter 820 881 IPR043926 GO:0140359
Glsi14g1586 1165 MobiDBLite consensus disorder prediction 1 24 - -
Glsi14g1586 1165 FunFam ABC transporter G family member 40 625 855 - -
Glsi14g1586 1165 Pfam ABC transporter 178 343 IPR003439 GO:0005524
Glsi14g1586 1165 Pfam ABC transporter 639 791 IPR003439 GO:0005524
Glsi14g1586 1165 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 611 863 IPR003439 GO:0005524
Glsi14g1586 1165 CDD ABCG_PDR_domain2 608 846 IPR034003 -
Glsi14g1586 1165 SMART AAA_5 187 422 IPR003593 GO:0016887
Glsi14g1586 1165 SMART AAA_5 648 840 IPR003593 GO:0016887
Glsi14g1586 1165 MobiDBLite consensus disorder prediction 1 23 - -
Glsi14g1586 1165 Gene3D - 625 860 IPR027417 -
Glsi14g1586 1165 Pfam Plant PDR ABC transporter associated 496 558 IPR013581 -
Glsi14g1586 1165 Pfam ABC-transporter N-terminal 92 152 IPR029481 -
Glsi14g1586 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 349 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi14g1586 Glsi-ChrGlsi14 16346428 16352839 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1586 636 823 Calmodulin-binding Proteins AT2G36910 25.773 6.54e-06 48.9