Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1582 ATGAACGGCGAAAGCCGAAGACGGGACTGGAGAGATCCCCGCAGATCCAAGAAGCAGAAGCTAATCCGCAATGCTGAGGAAGAGATTGAGTCAAAATTAGGGTTCGATCTTTTCTCAGAGGGTGAAAAACGACTTGGATGGTTGCTCAATTTTTCTTCCTCATCATGGGAGGATGAAGACACACACAAAGTCTATAGTTGTGTAGATCTTTATTTTGTTACACAGGATGGTTCCACATTCAAGTCAAAATACAAGTTTCACCCTTATTTCTATGTAGCTACAAAGAATAAAATGGAGATGGATGTTGAAGCATATCTTAGACGGCGTTATGAAAGTCAGATTGCAGATATCGAAATTAAAGAGAAAGAAGACCTTGATCTTAAAAACCATTTGTCTGGATTACAAAAATATTATTTAAAGCTATCCTTTGATACCGTACAACAATTGATGAATGTGAAGAGTGATCTGATGCATGTTGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGAAGCCTATGAGTCCATATTAACAGGAAGAAGGGAACAAAAACCTCAAGATTTTCTCGATTGCATAACTGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGATGCGGCCAATGGTACGATGTTAGTGTGTCCAATACTGCAGTCGTACTTGAGAAGAGAACAGATCTTTTGCAGCGTGCTGAAGTTCGTATTTGTGCATTTGACATTGAGACCACGAAACTTCCATTAAAGTTCCCTGATGCTGAATATGATTTAATTATGATGATTTCATACATGGTAGATGGTCAAGGCTATTTAATCATAAATAGAGAGTGCGTTGGGGATGACATAGAGGATTTGGAGTACACTCCAAAACCGGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGGTTGAGCTTCTTAGATTATGGTTTTCCCATATGCAAGAGTTGAAACCTGGCATCTATGTGACGTATAATGGTGATTTCTTTGATTGGCCATTTTTGGAAAGAAGGGCAGCCCATCATGGGTTGAAAATGAGTGATGAGTTGGGTTTTCAATGTGACAATAATCAAGGAGAATGCCGAGCTAAATTTGCTTGCCATTTAGATTGCTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGGAGCCAGGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCCTGGAGGTGAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCCGTTTCTGATGCTGTGGCAACTTATTTCTTATATACAACCTATGTTCATCCCTTTATTTTTTCTCTTGCAACTATTATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACAAGGCTAATGTTATCTGTCCTAACAAACACCAATCTGATCCGGAGAAATTTTACAATAATCACCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTATTTAGATCTGATCTTCCATCTAGTTTTACACTTGAACCATCAGGATTTGAGCAATTGATCGACAACCTTGATCGAGATCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGAATCTGTCTCTAATTATGATGAAGTGAAGAAAGTTATCATGGAAAAGCTTATAAATTTGCGAGACAAGCCAATACGGGAAGAATGCCCCCTCATTTATCATCTGGATGTAGCTGCCATGTATCCAAACATAATCTTAACAAACCGGCTTCAGCCACCTTCAATAGTTACAGATGAGGTCTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACTTGCCTTCGGACACTTGAGTGGGTTTGGCGTGGAGAAACATTCATGGCAAAGAAAAGTGATTATTATCATTTAAAGAAGCAGATTGAGTCAGAGTTTGTTGATGTTGCTGATAGGCAGTTATCAAAATCTTTTCTTGACCTGCCTAAGTCAGAGCAACAATCAAGGCTAAAAGAGCGTCTAAAGAAATACTGCCAAAAGGCATATAAACGGGTACTTGACAAACCAGTCACTGAACTTCGTGAAGCAGGGATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGTGATAGAAGATATGAATACAAAGGTCTTAATAAGGTTTGGAAGGGAAAGTTGTCAGAAGCTAAGGCCAGCGGAAATTCTATAAAGATTCAGGAAGCACAAGACATGGCAGTGCTTTATGACTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGAGCAAGATGGTATTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCGAAAATCATTCAGAATGCTCGCTTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTAGATACAGATGGTATCTGGTGTGCACTGCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACTCAAAGAGGAAATTGACTATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAAGGAATAATACAAATGATCAGTACCAGACACTTACAGATCCAACTAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAAGTGGATGGACCATACAAGGCAATGATCCTTCCTGCTTCCAAAGAAGAAGGAATTCTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCGGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGAGGTTTTTGACAAGTTTCTCCATGGCTCAACCTTAGAGGAATGCTATTCAGCTGTTGCTTCTGTGGCAAATAGCTGGCTTGATCTTCTTGATAACCAAGGAAAGGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTACGGTGTGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGGCTTGCTGACTTTCTTGGTGATGCAATGGTCAAAGATAAAGGCCTCCGTTGTCAGTACATAGTAGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTCCCTGTGGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAAGTCTCAGCTGATGTTGGCATTCGATCCATAATTGACTGGTCCTATTACAAGCAACGGCTAAGCTCTGCAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCGAGGGTAATTCATCCCGATTGGTTGCATAAGAAGGTTCGTGAGAAGGAGGACAAATTTCGGCAACGAAAATTAGTTGACGTCTTCAAATCCATGAACAGGGATGGAGACTCTAAAAAGCCTAGTGATTCTGATAATGTCTGCCATTTGATGGCTGGAGAGACTATTAATGACTTGGAAGACTTTGGAAACAAGAGCAGGAGTAATATGAGTGGAGCCAGGCCAATTATACGACGTTATGAGCCTAATAATGAACAGAATTCAGTGAAGCCTAATGGTGATGAAGATTCTGAGCAACAACATAATGATCATAACAGCAAGGGTCAGCCACTTGAACTACTACAAGAAGTTGGATTGTCATCTGAAAATGTTGACAGAACTGTAGATTATCAAGGATGGCTTCAGATAAAGAAGAGAAAGTGGAAAGATATAATGGAAAGAAGAAAGAAGCAAAGATTGGAGAATTTGAAGAAATCAGGCCATGCTAGTGGCAATCTCGAAAGACTGAGTAATAAGATTGATCATAAAGCTCAGGGAAGAAATAATGTTGGTTCATATTTCAAAAGGCACGAGGTGGTCTTGACACGGTCCCACTGGCAGATAATACAGCTAGTTCACAGTTCACAGATTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGAGTTATGCTTAAGATTCCGGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCTAGATCACCTATTACTGAGCAATTTGTGGGTAAGCGTGTCAACAAGACTCTTCCACATGGAAGGCATAATTATAACTTGTATGAGGTTACAATTGACGAAGTTCAATTTAAAGAAGCAAGCAAAAAGCTTGCTGCTCTTCTTGCAGATCCTGATGTTGAGGGAATATATGAAACAAGGGTGCCACTGGAGTTTAAATCCATAGTCCAGTTTGGTTGTGTATGTAAGGTGGACAAAACTGCCAAAAAACGTAGTCTACACGAACCTTGGAGTCTGAGTGAATTGCACATGAAGACCACTACAGAATGTGCTTATCTCGAACAATCCATATCCTTCTTTTACTTGTATCATAGCATCTCTGAGGGACGAGCTATATATGTTGGATATTTTCCTGCATCGAAAGCAATATCTGTTGTGGTAGTTAATCCCTATCAAAATAAAGACTTATCTCCTATTTTTCTTGAAAGACAATTTCGTGATGCTTGCCAAGCTTTGTCTATTGAGTCACCTCCCAGGAATGGTATTAGTTTTAAGGTAGACTATGTTGTGCTTGTCAAGGATGCTGAAACCATGATGCAAAGAGCAATAAATGATCACAGGAATGAACACCATGGGCCTATGGTTGCTGTCATTGAATGCCCAAATCCTCAATCAATGAAATTGGGTATTCAAGCTCTAGATGACTTCCCATGCCTAAACATTCCTGCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAGCAAGTTGCTGCAAAAACTGGAATGCAACGTTGTGCTGCATCAGTCCAGTGGCTAAATGAAAGAATTTCTCTCTCAAGATATGCCCATGTACCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGCAGATATCTTCTTTTCAAGAGCATTGATCGATAATCAACAGGTACTTTGGATATCTGATGATGGCCTTCCAGATTTAGGTGGCATTAACGAAGAAGAGACATGTTTTGCTGATGAGGTCCACCAACCTGTTCTTACCTATCCTGGAGCTTATAGAAAAATTACAGTGGAGCTAAAGATTCACCATCTGGCTGTGGATGCTCTTCTTAAAAGCAACCAAGTTAATGAATTGGAAGGAGGTGCTTTGTTAGGATTTGATCATGACTTCAACTCTGGATCATTTGCCATAAATGATCAGAATGGCTTTGATGAGGCTACCTCATGTGCACATGCCTTTCGAGTCCTAAAACAATTGATCCAGCGGTGCCTTGCAGATGCAGTTACATCTGGAAATGTATACGCTGATGCAATATTGCAACATCTATATCGATGGCTTTGCAGCCCTCAATCAAAACTTCATGATCCAGCTCTTCATCAGCTACTCCACAAGGTCATGCAAAAGGTCTTTGCATTGCTGTTGGCAGAGCTCCGTAAATTGGGAGCAACAATTGTTTTTGCAAACTTCTCAAAAATTATTGTAGACACAGGAAAATATGATCTGCCTGCAGCCAAAGCTTACTGTGATAGTTTGTTACGAACTCTGCAATCTAGAGATTTATTTGAATGGATTGAGCTTGAACAACTACAGTTCTGGCACTCATTGCTATTCATGGATCAGTATAACTATGGAGGAATACCAGCAAAATCTGAAGAAGCTATAAATGATGAATCTCAAGTTGACATTATATCAAGTTGGAATATTGCTGAATACTTACCTAAGAAAATCCAGGACCATTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGAACTATGCGCAAAGACAAGCTGCAATAAGGGCATCATTGCAAAATGCAGACTCCTGCACCCCATCAATTACTATTGGGGCTGCGGAGAACTTTGAATCACATATGACAGAATATATTAAAGGGCAGATCAGCTCTTACTTCACGGACAGACTTCTGGGAATTGTACGTGATATTGTGCTTCATATTAAGGAGATGAGAAGATCAGAAAATGATCAGAATGTATCATCTGGCAATTCCCAACTTGCAGGTGATGTCCACAGAGGGGATCCAGCTTTGGAGTTTATCAAGCATGTCTGTGCTGTCCTGGCCCTGGACCAGAGTGTGCAGCATGATGTTTTGGTCATGAGAAAGAATTTGTTAAAATATGTTCATGTCAGGGAGTTCGCTCCGGAAGCTGAGTTTCGTGATCAGGGTCATTCCTTTATCTTACCCAATGTCATCTGCAGCTACTGTAATGACTGCAGAGACTTGGACTTGTGCCGTGACTCTGCTCTATTGAGTCAGGAGTGGCATTGTGCTGTGCCACAGTGTGGGCAGCCATATGACCGTGAGGTGATGGAAAATGCTCTTCTTCAGATTGTACGACAGAGAGAACGGCTGTACCACCTGCAAGATCTGGTATGTCTTAGGTGCAACCAGGTGAAAGCTGCACATTTAGCTGAGCAATGTGCATGTGCGGGATCATATAGGTGCAAGGAAGATATAACTGATTTTCGTTCAAAGATGCAGGTTTTCTTTAAGATAGCCGTTCGGCAGAAATTCCAACTACTTCAGGAATGCACCTCGTGGATTTTAGAACTTAGATAG 6648 0.406 MNGESRRRDWRDPRRSKKQKLIRNAEEEIESKLGFDLFSEGEKRLGWLLNFSSSSWEDEDTHKVYSCVDLYFVTQDGSTFKSKYKFHPYFYVATKNKMEMDVEAYLRRRYESQIADIEIKEKEDLDLKNHLSGLQKYYLKLSFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESILTGRREQKPQDFLDCITDLREYDVPYHVRFAIDNDIRCGQWYDVSVSNTAVVLEKRTDLLQRAEVRICAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGCFKVTNVQNEVELLRLWFSHMQELKPGIYVTYNGDFFDWPFLERRAAHHGLKMSDELGFQCDNNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYFLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDLPSSFTLEPSGFEQLIDNLDRDLQYAIRVEGKMDLESVSNYDEVKKVIMEKLINLRDKPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRTLEWVWRGETFMAKKSDYYHLKKQIESEFVDVADRQLSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMAVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLTDPTRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYSAVASVANSWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGVQKSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSADVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVIHPDWLHKKVREKEDKFRQRKLVDVFKSMNRDGDSKKPSDSDNVCHLMAGETINDLEDFGNKSRSNMSGARPIIRRYEPNNEQNSVKPNGDEDSEQQHNDHNSKGQPLELLQEVGLSSENVDRTVDYQGWLQIKKRKWKDIMERRKKQRLENLKKSGHASGNLERLSNKIDHKAQGRNNVGSYFKRHEVVLTRSHWQIIQLVHSSQIGQFFAWVVVDGVMLKIPVSVPRVFYLNSRSPITEQFVGKRVNKTLPHGRHNYNLYEVTIDEVQFKEASKKLAALLADPDVEGIYETRVPLEFKSIVQFGCVCKVDKTAKKRSLHEPWSLSELHMKTTTECAYLEQSISFFYLYHSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPIFLERQFRDACQALSIESPPRNGISFKVDYVVLVKDAETMMQRAINDHRNEHHGPMVAVIECPNPQSMKLGIQALDDFPCLNIPANARDSQYQILGWQQVAAKTGMQRCAASVQWLNERISLSRYAHVPLGNFELDWLIFTADIFFSRALIDNQQVLWISDDGLPDLGGINEEETCFADEVHQPVLTYPGAYRKITVELKIHHLAVDALLKSNQVNELEGGALLGFDHDFNSGSFAINDQNGFDEATSCAHAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAELRKLGATIVFANFSKIIVDTGKYDLPAAKAYCDSLLRTLQSRDLFEWIELEQLQFWHSLLFMDQYNYGGIPAKSEEAINDESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYAQRQAAIRASLQNADSCTPSITIGAAENFESHMTEYIKGQISSYFTDRLLGIVRDIVLHIKEMRRSENDQNVSSGNSQLAGDVHRGDPALEFIKHVCAVLALDQSVQHDVLVMRKNLLKYVHVREFAPEAEFRDQGHSFILPNVICSYCNDCRDLDLCRDSALLSQEWHCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLAEQCACAGSYRCKEDITDFRSKMQVFFKIAVRQKFQLLQECTSWILELR 2215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1582 2215 Pfam DNA polymerase family B 755 1070 IPR006134 GO:0000166|GO:0003677
Glsi14g1582 2215 Gene3D - 238 468 IPR036397 GO:0003676
Glsi14g1582 2215 SMART polmehr3 239 842 IPR006172 GO:0000166|GO:0003676|GO:0003887
Glsi14g1582 2215 Gene3D DNA Polymerase, chain B, domain 1 51 232 - -
Glsi14g1582 2215 SUPERFAMILY DNA/RNA polymerases 486 1115 IPR043502 -
Glsi14g1582 2215 Gene3D - 941 1125 IPR042087 -
Glsi14g1582 2215 FunFam DNA polymerase epsilon catalytic subunit 754 937 - -
Glsi14g1582 2215 MobiDBLite consensus disorder prediction 1218 1232 - -
Glsi14g1582 2215 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2213 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Glsi14g1582 2215 CDD DNA_polB_epsilon_exo 240 443 - -
Glsi14g1582 2215 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Glsi14g1582 2215 FunFam DNA polymerase epsilon catalytic subunit 723 798 - -
Glsi14g1582 2215 CDD POLBc_epsilon 503 1122 - -
Glsi14g1582 2215 MobiDBLite consensus disorder prediction 1186 1234 - -
Glsi14g1582 2215 Gene3D Palm domain of DNA polymerase 752 937 IPR023211 -
Glsi14g1582 2215 FunFam DNA polymerase epsilon catalytic subunit 941 1125 - -
Glsi14g1582 2215 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Glsi14g1582 2215 SUPERFAMILY Ribonuclease H-like 57 467 IPR012337 -
Glsi14g1582 2215 Pfam Domain of unknown function (DUF1744) 1533 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Glsi14g1582 2215 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Glsi14g1582 2215 SMART DUF1744_2 1517 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1582 Glsi-ChrGlsi14 16246620 16286158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1582 1 2105 Core DNA Replication Machinery Family AT1G08260 71.922 0.0 3096