Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1575 ATGTGTTTTGAAGCTTCTCTGCGGGTAGAAACCATGTCCATCACCTTCTGCTTCTTGTTCTTCTCCTTCACCGCTCTCTTCTCTGTGTTTTCCTTTCTAATCTTCCTCTTGAGGATGAAGCCCTGCTGTAACTGCGACATCTGTCGTAGCTACTTAACTGTGAGTTGGGCTAACGAGTTCCGCAATCTCTGCGATTGGTACACTCATCTTCTCCGAAAGTCACCCACAGGAACCATTCACGTTCATGTGCTGGGAAACTCCATCACGACCAACCCAGAAAACATTGAGTACATCCTCAAGACCCGCTTTGACAACTACCCAAAAGGGAAGACATTCTCTACCATCCTCGGTGATCTTCTGGGTCGTGGAATCTTCAATGTCGACGGCGACTCATGGAAGTTTCAGCGCAAAATGGCAAGCCTAGAGATAAGTAGCGTTTCGAATCGATCCTACGCTCTAGAGATCGTCACTGACGAGATCCAATCAAGGCTAATTCCTCTCCTGGCTTCAACTGCATCCGGTGAACGTGGTGGAGCATTGGATTTGCAAGACATTTTGCGGCGATTCTCTTTCGACAACATTTGCAAATTCTCTTTCGGATTGGACCCAGGATGTCTCCTTTCATCCCTCCCCTCGTCGAGATTCGCTGACGCATTTGACCTCGCCTCGAAGCTATCGGCGGAGCGAGCAATGATGGCGTCGCCGGTAATATGGAAGATGAAACGCCTTTTTAACATAGGATCAGAGAAGAAACTAAAGGAAGCGATAAACGTCGTGAATGATTTAGCGGAGGAGATGATAAAACAGTCTCGAGAAATGGATTTTTCTACACGAAAAGACCTTCTCTCTAGATTCATGAGCTCAGTGAACGACGACAAGTACCTCAGAGACATCGTCGTAAGCTTTCTCCTGGCGGGTCGTGACACGGTGGCTGCCGCATTGACCGGTTTCTTTTATTTATTGTCAAAGCACTCCCAAGTTGAATCGTTGATCCGAGAAGAGTTGGACCGGATCATGGATCCGGATCAGGAGGTGGCAAGCTTCGAACAAATGCGGCACATGCATTACCTGAACGCGGCGGTTTATGAGAGCATGAGGCTGTATCCACCGATTCAGTTCGATTCAAAATTCGCGGTAGAGGATGATGTTTTACCGGACGGCACGTTTGTACGGAAAGGGACTAGGGTTAGCTACCACCCGTATGCAATGGGTCGGATGGAGCGGATTTGGGGCCCGGATTGTCTTGAATTCAAGCCAGAAAGGTGGTTGCAAGACGGTGTCTTTGTGCCGGTGTGCCCATTTAAATACCCGGTTTTCCAGGCTGGGCTTAGGGTTTGTTTGGGAAAGGAATTGGCTCTCGTGGAGATGAAATCTGTTGTGGCTGCCCTAGTCCGAAGGTTTGATATTCGGGCAGTAGGAGTGAACCAGGAGCCCCGGTTCGTCCCGGGTCTTACAGCCACCGTGAGAGGAGGCCTTCCGGTTCAAGTTCGTGACAGAAGACGATGA 1506 0.4934 MCFEASLRVETMSITFCFLFFSFTALFSVFSFLIFLLRMKPCCNCDICRSYLTVSWANEFRNLCDWYTHLLRKSPTGTIHVHVLGNSITTNPENIEYILKTRFDNYPKGKTFSTILGDLLGRGIFNVDGDSWKFQRKMASLEISSVSNRSYALEIVTDEIQSRLIPLLASTASGERGGALDLQDILRRFSFDNICKFSFGLDPGCLLSSLPSSRFADAFDLASKLSAERAMMASPVIWKMKRLFNIGSEKKLKEAINVVNDLAEEMIKQSREMDFSTRKDLLSRFMSSVNDDKYLRDIVVSFLLAGRDTVAAALTGFFYLLSKHSQVESLIREELDRIMDPDQEVASFEQMRHMHYLNAAVYESMRLYPPIQFDSKFAVEDDVLPDGTFVRKGTRVSYHPYAMGRMERIWGPDCLEFKPERWLQDGVFVPVCPFKYPVFQAGLRVCLGKELALVEMKSVVAALVRRFDIRAVGVNQEPRFVPGLTATVRGGLPVQVRDRRR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1575 501 Coils Coil 252 272 - -
Glsi14g1575 501 CDD CYP86A 75 492 - -
Glsi14g1575 501 PANTHER CYTOCHROME P450 34 494 - -
Glsi14g1575 501 SUPERFAMILY Cytochrome P450 61 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 Pfam Cytochrome P450 88 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 Gene3D Cytochrome P450 54 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1575 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1575 Glsi-ChrGlsi14 16184995 16186500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1575 33 499 Cytochrome P450 AT2G27690 62.869 0.0 605