Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1556 ATGACTTCCTGGGTAGAGTTTTCAACAGTTCTTCAGTTCTGGTCATTTATGCCAGAGCAATCGACTTTTACTGAAAAACCTTGCATGGCGAGCCATAGAATAGGAGAAACTGGTTTGTCTGAGTCAGGACCTTCAGGTCATCATGTCCCTTACGGAGTTCTTCACGGGATTAATACTCCTGCATCCAGCTTCATAAATCAAGGATCTACTTTTGATTTTGGAGGGTTGGAAGAGGCAATTGTTCTGCAAGGAGTGAAGATTAGAAATGATGAAGCTAAAGCACCTTTATTCACAGGGAGGCCTGCAGCTACTCTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGTAGGAGGTTCAAAGTCAGGAGGGGAGAGCACTGATTCAGGATCAGCTATGAACACTCTTTCTAGTAAAACTGACCCACAGTTTGAATCAGAATCTCCCATAAGTAAAAGGGCATCTTCTTCAGATCATAAGGATTTTGATCAGCAGCATCTGCAGCTTCAACAGCAGCTACAACAGGAGATGGCAAGCAATGTTTCAAGATGCCAATCACAGAATCAATCAGCTGCCAAATCACCTCAGGAAAAGAGGAAGGGAGCTGGTTCCACATCAGAGAAACAGCTTGATGCAAAGACGTTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTTCCCAGATCGAACAAGATCTTCAGAGAGCGCGTTCGCAGGGACTTTTGTTGGGCTGTGGTGGTGGTGCTGCTAGTGGCAACATAAGCACCGGAGGTGCAATATTTGACATGGAATATGGAAGATGGTTAGAAGATGAGCAGCGGCTCATGGCGGAGCTGCGGAGCAGCATGCAGGCGGCGCTATCAGATAGCGAACTGAGAGTGATTGTGGACGGATATTTGTCACATTACGATGAGATATTTCATCTGAAGGGAATTGCAGCAAAATCAGATGTGTTTCACCTCATCAATGGCATGTGGACTACCCCAGCTGAGCGATGCTTCCTTTGGATTGCTGGTTTTAGGCCCTCTGACCTCATTACGATGGTGATACAACAGTTAGAGCCACTAGCAGAGCAGCAAATAATGGGGATGTATGGGCTACGGCAATCCTCACAGCAAGCAGAGGAGGCTCTGTCTCAAGGCCTTGAACAGCTCCACCACTCTCTCGTTGACACCATCGCCGGAGGCCTCGTGGTTGATGGCGTCCAACAGATGGTCCTCGCCATGGGCAAGCTTTCCAATCTTGAAGGTTTTGTCTGCCAGGCTGATAATTTGAGACAGCAGACCCTTCACCAATTGTGTCGCTTACTAACAGTTCGTCAAGCAGCACGATGTTTCCTTGTGATTGGAGAATACTATGCCCGTCTTCGCGCCCTTAGTTCTCTTTGGGCTTCACGACCACGACAGTGCTTGATGAACGATGAGAATTCATGCCAAACGACCACCAACATGCAAATGGTTCAATCGTCTCAGAATCATTTCTCGGGTTTCTGA 1566 0.4713 MTSWVEFSTVLQFWSFMPEQSTFTEKPCMASHRIGETGLSESGPSGHHVPYGVLHGINTPASSFINQGSTFDFGGLEEAIVLQGVKIRNDEAKAPLFTGRPAATLEMFPSWPMRFQQTPRVGGSKSGGESTDSGSAMNTLSSKTDPQFESESPISKRASSSDHKDFDQQHLQLQQQLQQEMASNVSRCQSQNQSAAKSPQEKRKGAGSTSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQIEQDLQRARSQGLLLGCGGGAASGNISTGGAIFDMEYGRWLEDEQRLMAELRSSMQAALSDSELRVIVDGYLSHYDEIFHLKGIAAKSDVFHLINGMWTTPAERCFLWIAGFRPSDLITMVIQQLEPLAEQQIMGMYGLRQSSQQAEEALSQGLEQLHHSLVDTIAGGLVVDGVQQMVLAMGKLSNLEGFVCQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYARLRALSSLWASRPRQCLMNDENSCQTTTNMQMVQSSQNHFSGF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1556 521 MobiDBLite consensus disorder prediction 117 155 - -
Glsi14g1556 521 MobiDBLite consensus disorder prediction 204 219 - -
Glsi14g1556 521 Pfam bZIP transcription factor 216 252 IPR004827 GO:0003700|GO:0006355
Glsi14g1556 521 SUPERFAMILY Leucine zipper domain 217 259 IPR046347 GO:0003700|GO:0006355
Glsi14g1556 521 Pfam Seed dormancy control 300 374 IPR025422 GO:0006351|GO:0043565
Glsi14g1556 521 ProSiteProfiles DOG1 domain profile. 282 490 IPR025422 GO:0006351|GO:0043565
Glsi14g1556 521 MobiDBLite consensus disorder prediction 108 219 - -
Glsi14g1556 521 MobiDBLite consensus disorder prediction 170 199 - -
Glsi14g1556 521 FunFam BZIP family transcription factor 216 265 - -
Glsi14g1556 521 Gene3D - 216 265 - -
Glsi14g1556 521 SMART brlzneu 213 279 IPR004827 GO:0003700|GO:0006355
Glsi14g1556 521 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 215 259 IPR004827 GO:0003700|GO:0006355
Glsi14g1556 521 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 220 235 IPR004827 GO:0003700|GO:0006355
Glsi14g1556 521 Coils Coil 293 313 - -
Glsi14g1556 521 Coils Coil 236 263 - -
Glsi14g1556 521 PANTHER TRANSCRIPTION FACTOR TGA9 161 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1556 Glsi-ChrGlsi14 15964870 15970203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1556 168 521 bZIP Transcription Factor Family AT1G08320 67.598 2.40e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g1556 DOG1 7.2e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1556 14 15964870 15970203 Glsi04g0496 04 3360075 3366489 CCT
Glsi14g1556 14 15964870 15970203 Glsi14g1556 14 15964870 15970203 ECH