Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1553 ATGTGTAGAGGAGAAACTAGACAAGAACCAAATTGTCAGAAGTTTAAGCCAAGTGCGATGTACCAGAATCACGCAAAGAACATCCATTCTTCTTCCAGAATGCCAATCTCGTCTGAGAGGCATATGTTCCTTCAAACAGGAAATGGGTCTGGTGATTCTGGACTTGTACTCTCAACTGATGCTAAGCCTAGATTGAAATGGACAACAGATCTTCATGCGAGGTTTACAGAAGCAGTCAATCAGTTGGGCGGAGCTGACAAGGCTACACCCAAAACAGTAATGAAACTCATGGGGATTCCAGGGCTTACCTTGTATCATCTTAAGAGCCATCTTCAGAAGTATAGACTGAGCAAGAATCTGCATGCACAAAGTAACAATGTGACGCACAAAATCAGTGCAGCAAGCGGAGAAAGACTCTCTGAAGCAAATGGAACTCATAATCATATGAACAATTTAAGCCTTGGGGCGCAGGCTAATAAAGATTTACATATAAGTGAGGCGCTGCAGATGCAGATTGAGGTACAGAGAAGGCTAAACGAACAACTTGAGGTGCAGAGACACTTGCAGCTCCGCATAGAGGCTCAAGGAAAATACCTGCAGGCTGTGCTGGAAAAAGCTCAGGAGACGCTTGGTAGACAGAATTTGGGAATAGTAGGACTTGAAGCGGCTAAAGTTCAAATCTCAGAGCTCGTGTCCAAAGTATCATCTCAGTGTCTGAATTCTGCTTTTTCAGAACTGAAGGAATTACATGGATTGTGCCCCCAGATCACACAAACCAACCAACCAACCGACTGCTCAATGGACAGTTGCCTCACTTCCTGCTGCGAGGGATCTCAAAGGGAGCAAGAGATACAAAATGGAGGGATGGTCTTAAGAACCTTCAATGGCCAAACGTTCATGGAACGAAAGGAAGCCGTTGAGGCGCCCATATTACGGAACTCGGAACTCAAGTGGTGTGATGAAGTGAAAAATAACAATTTCCTTAACCCTTTAGGCAAGAATGCAGAAAAAAGTTATGCCGTAGAAATAAGTCCCAGCAACTTAACTATGAGCATCGGACTTGGAGGAGAAACAAATAATGGCAGCAGCATTTATCCTGAGAGAACAATCATGGGGAGAGAGACAGATGGTGAGTTCAATAGAAAAGAATCAATGAAAACAGCGGATGAAAAAGTTTCTGGAGACTATAGATTGCCCTACTTTGCAACATCGAGACTGGACCTTAACACCCATGATGCTGCAACGAATTGTAAACAACTGGACTTGAATGGATTTAGTTGGAGCTGA 1287 0.4375 MCRGETRQEPNCQKFKPSAMYQNHAKNIHSSSRMPISSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTTDLHARFTEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHAQSNNVTHKISAASGERLSEANGTHNHMNNLSLGAQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQISELVSKVSSQCLNSAFSELKELHGLCPQITQTNQPTDCSMDSCLTSCCEGSQREQEIQNGGMVLRTFNGQTFMERKEAVEAPILRNSELKWCDEVKNNNFLNPLGKNAEKSYAVEISPSNLTMSIGLGGETNNGSSIYPERTIMGRETDGEFNRKESMKTADEKVSGDYRLPYFATSRLDLNTHDAATNCKQLDLNGFSWS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1553 428 NCBIfam myb-like DNA-binding domain, SHAQKYF class 62 117 IPR006447 GO:0003677
Glsi14g1553 428 Gene3D - 61 119 - -
Glsi14g1553 428 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 25 289 IPR044848 GO:0003700
Glsi14g1553 428 FunFam Myb family transcription factor 61 119 - -
Glsi14g1553 428 Pfam MYB-CC type transfactor, LHEQLE motif 163 209 IPR025756 -
Glsi14g1553 428 Pfam Myb-like DNA-binding domain 64 115 IPR001005 -
Glsi14g1553 428 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Glsi14g1553 428 Coils Coil 165 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1553 Glsi-ChrGlsi14 15927705 15930011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1553 94 427 G2-like Transcription Factor Family AT3G04030 51.176 2.85e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi14g1553 Myb_DNA-binding 8.2e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1553 14 15927705 15930011 Glsi04g0498 04 3382075 3385616 CCT