Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1539 ATGGAGAACCTACCACCTGGTTTTCGCTTCTATCCGACAGAAGAAGAGCTAGTTGCTTTCTATCTACAAAACAAGCTTGAAGGGCAAAAAAACCACATTAACAAAGTTATCCCAGTCGTTGGCATTTATGACGTAGAGCCCGAGCAGCTTCCAGAACTTGCAGGCGAGATGTGTCGTAAAGACACAGAGCAATGGTTTTTCTTTTCACCAAGACAGGAGAGAGAAGCAATGGGAGGCAGACCCAACAGAACCACAGCTCGTGGGTATTGGAAGGCCACAGGTTCTCCCGGGTACGTTTACTCTTCTGATAATAGAGTCATAGGGATTAAGAAAAACATGGTTTTTTACGAAGGGAAAGCTCCTTGTGGAAGGAAAACTGGGTGGAAGATGAATGAATACAGAGCTATTGAAGTATCCGAGTCTGATCAATCCAGTGTCGCCACTCCTAAGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTCATATCGGGAAGCTTTGGAGCATTTGATCGTCGCCCTCTGGAGAAGTTAACAGTGAAGTCACAAAAACGCCGTTGGGACAGAGCTGCTGCTGCATGTCCTCAGCAGAACGAAGTGATGGATGGAACAAGCTCATTTGAAACTTCCCACTTAGGAGGAGAACACAGTACCGATTTCCCAGATGCTGGAGGGTCAAGTAGCACAAATTGGAATGTATATAACGGGGTAGATTCTCTTCCCGCCATGGATCTCTCGAATTGTATCAAAGGACCTCTATGGGAATGGGAACAGTTTAATATGGTCTGA 789 0.4575 MENLPPGFRFYPTEEELVAFYLQNKLEGQKNHINKVIPVVGIYDVEPEQLPELAGEMCRKDTEQWFFFSPRQEREAMGGRPNRTTARGYWKATGSPGYVYSSDNRVIGIKKNMVFYEGKAPCGRKTGWKMNEYRAIEVSESDQSSVATPKLRHEFSLCRVYVISGSFGAFDRRPLEKLTVKSQKRRWDRAAAACPQQNEVMDGTSSFETSHLGGEHSTDFPDAGGSSSTNWNVYNGVDSLPAMDLSNCIKGPLWEWEQFNMV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1539 262 SUPERFAMILY NAC domain 2 161 IPR036093 GO:0003677|GO:0006355
Glsi14g1539 262 MobiDBLite consensus disorder prediction 203 225 - -
Glsi14g1539 262 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Glsi14g1539 262 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 185 - -
Glsi14g1539 262 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Glsi14g1539 262 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1539 Glsi-ChrGlsi14 15821405 15822427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1539 2 260 NAC Transcription Factor Family AT3G44350 51.538 9.89e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g1539 NAM 2.4e-31 No_clan