Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1529 ATGATGGATGGGGTTTCTAGGGAAGCGGAAATGTCAATTACTGCCTCGTCCATGTTTCCTGGGTTCAGGTTCTGTCCTACCGACGAGGAGTTGATTTCATATTACCTCAGGAAGAAGTTGGACGGCCATGAAGAGAGTGTTCAAGTGATTACCGAGATTGAGCTTTGCAGATATGAGCCCTGGGATTTACCAGCCAAATCATTCATGCAGTCAGATAACGAGTGGTTCTTCTTCTCCCCTCGTGGAAGAAAGTATCCAAATGGTTCACAAAGTAAGAGGGCAACAGAATGTGGTTATTGGAAGGCGACTGGAAAAGAGCGCAACGTAAAGTCAGGTTCTAATGTTATAGGCACCAAGCGAACTTTGGTATTCCACTTGGGTCGTGCACCAAAGGGAGAAAGGACTGAATGGATAATGCATGAGTACTGCATCAACGACAAGTCTCAGGATACTTTGGTTGTTTGTCGTCTAAAGAAGAACCCAGAGTTCCGTTCGAACGATGCTCCAAATAGAGCTTCTTCAAGTCAAACGCTGGCTGTGAATTCGCATGAAAGTAACTGTGAAGCTGATTTGGATCAGAGGGATGCGTCTGAACAAGATAAAGGAGTTGGATGTAGTTCAAAGCGCAGCAGCTGCAGTTATGGGTCTGCTTCAGTGGAGCAAATTGATTCTGCCTCTGAATCCAATCAGAGACCAGCTGTTGACGCTACTTTGACAGAAACTTCCAGTCAGAGACCAGAGGTGGATGAAGATGATTGTTATGCTGATATACTGAACGATGATATCATCAAATTAGATGAATCTTCACTGAACACACAACAAGAGGCTAACTCAAAATGGCAGGATCCTCCCCAAGGCACGGCACAACGAAGAATTAGATTAAGGATGCAGAAACCGAGGCATTCTCCTGCAGGACTTGGTTTTCCAAGCTCAAACCACCCATCAAAGACTAGCATTTTTTCTACAATCACGAACCGTTTCATGCTTACTGCTTTCTTCGTTATAAGTTTGATAGCTCTATATTTGTCCTTATTGGGAGGTCTCAAACAAGTGAGGAGCTGTGGGAAATTTGGTTTGGGATGCAAATTCTGA 1092 0.4423 MMDGVSREAEMSITASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVITEIELCRYEPWDLPAKSFMQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDTLVVCRLKKNPEFRSNDAPNRASSSQTLAVNSHESNCEADLDQRDASEQDKGVGCSSKRSSCSYGSASVEQIDSASESNQRPAVDATLTETSSQRPEVDEDDCYADILNDDIIKLDESSLNTQQEANSKWQDPPQGTAQRRIRLRMQKPRHSPAGLGFPSSNHPSKTSIFSTITNRFMLTAFFVISLIALYLSLLGGLKQVRSCGKFGLGCKF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1529 363 MobiDBLite consensus disorder prediction 166 186 - -
Glsi14g1529 363 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Glsi14g1529 363 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Glsi14g1529 363 MobiDBLite consensus disorder prediction 203 243 - -
Glsi14g1529 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 230 - -
Glsi14g1529 363 MobiDBLite consensus disorder prediction 164 250 - -
Glsi14g1529 363 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Glsi14g1529 363 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Glsi14g1529 363 MobiDBLite consensus disorder prediction 187 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1529 Glsi-ChrGlsi14 15747649 15749464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1529 5 274 NAC Transcription Factor Family AT2G27300 54.244 3.92e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g1529 NAM 7e-35 No_clan