Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1519 ATGGCTCTTATTGCCCGTATTCATCACCCCTATATTGTGGAATTTAAGGAAGCATGGGTTGAGAAGGTGAGGCCATTTCAGGGTTGCTATGTTTGCATTGTCACTGGATACTGTGAAGGTGGAGACATAGCTGAATTGATGAAAAGATCAAATGGGGTTTACTTCCCTGAGGAGAAACTCTGCAAGTGGTTCACCCAATTACTGTTGGCTGTAGAATACCTGCACTCAAACTATGTTTTACATCGTGACCTAAAGGATCAGGATGTTCGGCTGGGGGATTTTGGACTTGCTAAGAGACTAAAAGCAGATGACTTGGCTTCTTCAGTGGTTGGAACTCCCAATTACATGTGTCCTGAATTGCTTGCTGATATTCCTTATGGATTCAAATCTGATATTTGGTCGCTAGGGTGCTGTGTATATGAGATGGCTGCGCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGTTTGATCAGCAAGATAAATCGTTCATCTATTGGCCCTTTGCCACCCTGTTATTCCCCATCATTGCTGGTAATGACTGCTAGATATACTTGCTTGAATGCTTCTGATATCTTAAAGCACCCTTGTTTGCAACCTTATGTTAATCAGTATCGTCTATCATTCAGTCCTACAACCTGTTATCCCGAAAAACCAATTTCTGTTGCCCATGATGACCTTCCAAGAAATATGACTGAAAGTCATAACAGTACTAGTTCCGGTAGTGACAAATGTAGTTTGGTATCAAATGAAAGAAACATTTCAATAGCGATGCCAAAGTGTGGTAACAAAGCTACTGAGACTGATCTGGCATCTATTGATGAAGATGGCTCTGAGCATCTGGGTAGCAAAGAAGACAGCAACGGCAACGATAAAACAGATGAGCTGCAGGTGATGAATTCATTGCATAATGAACAGCAATCAATTGCTGAATCTAAGCAACCAAAAACAATTAAAAATATAATGATGTCATTAAAAGAGGGAAAAGTTAGAGAAAATAGTTCCCCAATGAGAGCCAATCGCATAAAGGCTGGCAGTGCAATACAGAAAACAAAGACAGAGACATTGCCTAAATTGCCCAAATCTAATTTTGTTGCTCCTGGTTTCAAGCCTAATTTAGAGTCACCAACTGTTGCACCTGCGAAGGTAACCCCTGATCCTGTAAAACGGATGTACGGATCACAGTTTTTAAAACATCAGTTACTAATGATAGACTCCTCACCAAAAACAAAACCCAGACATGATGGGACTCCCCCATGCGGTCCTATTAAACAAGTTGAAGGAGATGGTGTTCCTGCCAAGCCAAGGCAAAGGACCCCCCCAAGTTTGCTTAGACGACCTTCATATCCAGGACGAATGAGGCAGGTTGGGCTTGATGTTCCAAATGCAACGAGTGATAACGGGAAGTTGGAACCAAATAAAATTTCTCTGGACCCTGAAAAGAGTCCTTGTCAGTTGCCTAATGGTCATGTGCCATATGTTTATAGAGAACTTACAAGAGAGCCTCAAAAGGTTATTGGAAGAGATTCCAAAGGAATGCAAACAGATAGCAGCAATTCTGTCTCATCTTCAGTGTCTATTCAAGGATTTGAGCTTTCTGATGATGCAACAACTTTCATTGATTTGAAGGAACAGATAATTCCTGATCATGTAACCCACAGTGAAAAAGTAGAATCACGTCCAGATAGCAGCTCACCTGCTACCAATTTGCACTGTGCTATAGCTGAAGATATATATCGGGAAACCTCTGAGGTTACCTTACATATTCAGAATACAGTTACTAGTCATGAGAAAGTAAGCTCTAGTTTAACTCCTTCTGACCCACTTCCACATTCTAAGGAAATGTTTGTTTCTGAAGATGGTCTCCTCTCAAATCAGACTGCTATATCTGCTGCCTCTGGATGTGATAATAGATCCATAAGTTCCTCTGTTAACGCCGCTGAAGAAATCAAAGATCTTCAGGATACTAAGAAGGAAATGACTTCAACCAAGTCTCTCATACTTCCCCTCCCAAGTTCTGGAGAAAAGTTTGTTTGTGAAGTTGTTCCAGTAAGCAAGCCTAGTAATAGGCTTGATGTAGTTAGCAGTCCAAAACTCAAGTGTATTTCCACTGGTGATGACAAATTCACAGTAAGCGAACTACTGACATCAGTGACTGAAACTGCCCCTCCAGTTACCTCTACCAAACTATCAACCCAGGAAGGTTTGCAAGAAGAGAAAGGAGCTGTTTTGCAGAATCCATCGACAGAAAGGCCAGCTGTTGGCCAGCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGCTACCGTGTCGGTAATGAGCAACCAGTGAAGGAATCTGTGGAGATGGAAGTTCAAAATGTGGATGTTGGTAAATTTATTAATGTAGTAAGGGATGATTTAGAAGTGAGGAACGTGAGCACTTCTTTAACACCTGTATCGTCAAGTTGCTCTGAAGCTGTGAGCTTGAATTCAAATATTTCTGACCATCTAGAAATGAGAAACATGAGCTCTCCTCCTCCAATGGTTAAATCTTCAAGTTGCTCTGATGCCTTGAGCTTGAGATCAAATGTTTCTGATCATTCTGGTGTTAAGGAAGAAGATGGGAGAAATCCTGTTTCTCTATTTTCAAAATCTGATTCTGCTGAGATGACTAAATATAATGCTCTGACGACTGAAGAGGAAACACCAGCAAAGGAAACTCTGGATGTTAATTCTTTCAGGCAGAGAGCAGAGGCACTCGAAGGGCTCTTAGAATTTTCTGCGGATTTGCTGCAACAAAATAGATTGGAGGAACTTGCAGTGGTTTTAAAGCCCTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACGGCCATTTGGTTAGCCAGGAGTCTAAAAGGAATGATGACCGAGGACAGTGGGGGACGCTGTCCATGA 2928 0.418 MALIARIHHPYIVEFKEAWVEKVRPFQGCYVCIVTGYCEGGDIAELMKRSNGVYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKDQDVRLGDFGLAKRLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLLVMTARYTCLNASDILKHPCLQPYVNQYRLSFSPTTCYPEKPISVAHDDLPRNMTESHNSTSSGSDKCSLVSNERNISIAMPKCGNKATETDLASIDEDGSEHLGSKEDSNGNDKTDELQVMNSLHNEQQSIAESKQPKTIKNIMMSLKEGKVRENSSPMRANRIKAGSAIQKTKTETLPKLPKSNFVAPGFKPNLESPTVAPAKVTPDPVKRMYGSQFLKHQLLMIDSSPKTKPRHDGTPPCGPIKQVEGDGVPAKPRQRTPPSLLRRPSYPGRMRQVGLDVPNATSDNGKLEPNKISLDPEKSPCQLPNGHVPYVYRELTREPQKVIGRDSKGMQTDSSNSVSSSVSIQGFELSDDATTFIDLKEQIIPDHVTHSEKVESRPDSSSPATNLHCAIAEDIYRETSEVTLHIQNTVTSHEKVSSSLTPSDPLPHSKEMFVSEDGLLSNQTAISAASGCDNRSISSSVNAAEEIKDLQDTKKEMTSTKSLILPLPSSGEKFVCEVVPVSKPSNRLDVVSSPKLKCISTGDDKFTVSELLTSVTETAPPVTSTKLSTQEGLQEEKGAVLQNPSTERPAVGQLPPAFDDVIHVIRHSSYRVGNEQPVKESVEMEVQNVDVGKFINVVRDDLEVRNVSTSLTPVSSSCSEAVSLNSNISDHLEMRNMSSPPPMVKSSSCSDALSLRSNVSDHSGVKEEDGRNPVSLFSKSDSAEMTKYNALTTEEETPAKETLDVNSFRQRAEALEGLLEFSADLLQQNRLEELAVVLKPFGKDKVSPRETAIWLARSLKGMMTEDSGGRCP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1519 975 MobiDBLite consensus disorder prediction 407 453 - -
Glsi14g1519 975 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1519 975 MobiDBLite consensus disorder prediction 232 246 - -
Glsi14g1519 975 Coils Coil 643 663 - -
Glsi14g1519 975 SUPERFAMILY Protein kinase-like (PK-like) 3 246 IPR011009 -
Glsi14g1519 975 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 923 - -
Glsi14g1519 975 MobiDBLite consensus disorder prediction 225 246 - -
Glsi14g1519 975 Gene3D Transferase(Phosphotransferase) domain 1 1 276 - -
Glsi14g1519 975 Pfam Protein kinase domain 2 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1519 Glsi-ChrGlsi14 15575352 15580435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1519 3 196 MAP Kinase Kinase Kinase AT3G06030 31.455 1.24e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Glsi14g1519 Pkinase 1.2e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1519 14 15575352 15580435 Glsi04g0551 04 3729734 3738543 CCT
Glsi14g1519 14 15575352 15580435 Glsi14g1519 14 15575352 15580435 ECH