Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1502 ATGGCGACGTACTTTCATGGCAGCACTTCAGAAATCCCATCCTCTGCTGATGGGTTGCAGACACTTTACCTTCTCAACCCCGGCTACGTGCCCTACTCCGATACTCCCAACATGCTCCTTCTCAATCCCAACGCGCTCACCCTCCCCCACGCGCCTCCTCCCTCCTCCGAGCAAAACCTTATCCTCCGATCCAACAACCCTGACGAAATCTCCGGCTTCCATGGCTTCCCCAACGCCGCTGCGACAGCTCCTCGTGTCCACTATAACCTGTGGGGCTCAATGATTGATCAAACAACATCGGCGGGAGAAACCGCCGCTGCAGATGTCTCGCCGCATATGAGTTTCCGGAGGCCTAATCAGCAGGGTTTGTCACTGAGCCTTTCCGGCGAGCTTGGTGTTCCGGGACGTAATCAAGTTTCTGGCGGCGGTGATGATGAGATGAGGATTCTGGGTAATCCTTCGTCGTCGGTGTCCAATGGAATTTCGAGTGTTATTTTGGGGTCTAAGTATTTGAAAGCTGTGCAAGAGGTTTTGGATGAAGTTGTGAATGTTGGTATGGGAATCCACAAAGATGACTCAACAGAGAGGTCCACTAGAGAGAAGATGAAAAAGGCCAACAAAGAATCAACATCTGGGATTCGTGACGGTTCAAGTGGTGGAGCTGAACTCACTACAGCCCAAAGACAAGAGCTTCAGATGAAGAAGTCTAAGCTTGTTAGCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTATCACCACCAAATGCAAATTGTGATATCATCATTTGAGCAGGCGGCGGGTTTGGGTGCAGCAAAATCTTACACAGCGCTTGCCCTAAAGACAATCTCAAAGCAATTTCGATGTCTTAAAGATGCAATCGCTTCACAAATGAGAGCAACAAGCAAGAACTTGGGTGAGGATGATTGCTTGGGAGCTAAGGTAGAAGGTTCAAGGCTTAGATATGTTGACCATCATCTCCGGCAACAACGGGCACTGCAGCAGCTGGGAATGATCCAGCCCAATGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGAGCTGTCTCCATTCTTCGTGCTTGGCTTTTTGAGCATTTTCTTCACCCCTATCCCAAGGACTCCGATAAAGTTTTGCTTGCAAAACAAACTGGACTTACTCGGAGCCAGGTGTCTAACTGGTTCATAAATGCTCGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAACCAAGGAGCAAGAGCGGAATGGCTCCCAGGACAATACAAGCAGGTCAAACGAACGGGACAAGGAGCTGGGGTCAACAACTAACGCTCCACAGATCAAAGCCTTCCAATCTAAGCCAGAGAACCAAAAAACATCTCCAACCGAGATCTCAAATTCTTCAATGTCAACATCTCCCATGGGAATGGGAGGATATCTTCAACCCCACTCTGGCTTCCATCCAAACAAGCCTAGAAGCTCCGAAATGCACAACTCTCCGAGTAGTATGCTTTCCGTGGACATGGAAATGAAGCCCGGAGACACAGAAAGAGGTATGCAAAGGAACTGCAAAGATGGCTACCCTTTGATAACTGGTAATGATGGGGGCTATGGAGCATTCTCAATGGAAGACATTGGAAGGTTTAACATGCCCGACGAATTGGCTCCAAGGTTCCACGGAAATGGTGTTTCTCTCACTCTGGGACTTCCCCACAGCGACAACCTTCCCCTCTCGGGAGCCCAGCATGGATTTCTGTCGCACAATATAAATTTGGGAACCAACGGAACCGAGTTTTGTGCAATCAACACTCCACCATCTCATTCAGGCACCACCAGTTATGATAATATTGACATTCAGAGCAGAAAGAGGTTTGCTGCCCAGTTGTTGCCGGATTTTGTGGCCTGA 1899 0.4892 MATYFHGSTSEIPSSADGLQTLYLLNPGYVPYSDTPNMLLLNPNALTLPHAPPPSSEQNLILRSNNPDEISGFHGFPNAAATAPRVHYNLWGSMIDQTTSAGETAAADVSPHMSFRRPNQQGLSLSLSGELGVPGRNQVSGGGDDEMRILGNPSSSVSNGISSVILGSKYLKAVQEVLDEVVNVGMGIHKDDSTERSTREKMKKANKESTSGIRDGSSGGAELTTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQIVISSFEQAAGLGAAKSYTALALKTISKQFRCLKDAIASQMRATSKNLGEDDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVLLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQERNGSQDNTSRSNERDKELGSTTNAPQIKAFQSKPENQKTSPTEISNSSMSTSPMGMGGYLQPHSGFHPNKPRSSEMHNSPSSMLSVDMEMKPGDTERGMQRNCKDGYPLITGNDGGYGAFSMEDIGRFNMPDELAPRFHGNGVSLTLGLPHSDNLPLSGAQHGFLSHNINLGTNGTEFCAINTPPSHSGTTSYDNIDIQSRKRFAAQLLPDFVA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1502 632 Pfam Associated with HOX 164 295 IPR006563 -
Glsi14g1502 632 MobiDBLite consensus disorder prediction 436 475 - -
Glsi14g1502 632 SUPERFAMILY Homeodomain-like 345 410 IPR009057 -
Glsi14g1502 632 Gene3D - 347 426 - -
Glsi14g1502 632 SMART prehox3 159 296 IPR006563 -
Glsi14g1502 632 MobiDBLite consensus disorder prediction 413 435 - -
Glsi14g1502 632 MobiDBLite consensus disorder prediction 413 504 - -
Glsi14g1502 632 CDD homeodomain 344 405 IPR001356 GO:0003677
Glsi14g1502 632 FunFam BEL1-like homeodomain protein 9 347 409 - -
Glsi14g1502 632 SMART HOX_1 344 408 IPR001356 GO:0003677
Glsi14g1502 632 MobiDBLite consensus disorder prediction 485 503 - -
Glsi14g1502 632 Pfam Homeobox KN domain 361 400 IPR008422 GO:0003677|GO:0006355
Glsi14g1502 632 Coils Coil 228 248 - -
Glsi14g1502 632 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 107 427 - -
Glsi14g1502 632 MobiDBLite consensus disorder prediction 191 210 - -
Glsi14g1502 632 ProSiteProfiles 'Homeobox' domain profile. 341 404 IPR001356 GO:0003677
Glsi14g1502 632 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1502 Glsi-ChrGlsi14 15453516 15456127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1502 1 632 Homeobox Transcription Factor Family AT2G35940 44.017 9.44e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Glsi14g1502 POX 1.3e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1502 14 15453516 15456127 Glsi04g0559 04 3808239 3811800 CCT
Glsi14g1502 14 15453516 15456127 Glsi14g1502 14 15453516 15456127 ECH