Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1495 ATGGATGTTGATTCCTCGATGGCGCCGGAAACTGATCACGATCCGGTCGTACAGAACCATACCACTACTCCGGCTCCGGCAGCAGCAATGGAGGGAGAACAGCTAGGAGGGCAGCCGTCGTCAGGAGGCGGATCTCCGGCACAGTCACCACTGCAGCAGCAACAGCAGCAGGCGGCTGCCCAGGTGCAGCAGAGTCCGGTTGTTGGACCAAGGCTGGCGCCAACTTACAGTGTCGTGAATGCAATTCTAGAAAAGGAAGAGGATGGGCCAGGGCCGAGGTGTGGCCACACGTTGACCGCGGTGGCAGCTGTTGGAGAGGAGGGTACACCTGGGTACATTGGTCCGAGGCTGATTTTGTTCGGTGGTGCTACTGCCCTTGAAGGGAATTCTGCGGCTACTGGGACTCCTTCATCCGCTGGGAATGCTGGCATACGTTTAGCTGGTGCAACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCTTTTGGAGAACCTCCAACTCCAAGGGCTGCACATGTGGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTATCAGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAACGGCCAAGATGGCATAGAGTTGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAGAGACCCTTGGCTGATGTATGGGCCTTGGATACAGCTGCTAAGCCTTATGAATGGCATAAGTTGGAGCCAGAAGGAGAGGGCCCGCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTGCCAATGCCTAGTGCATATGGACTTGCGAAGCATAGGGACGGTCGGTGGGAGTGGGCAATTGCCCCTGGTGTCTCACCATCTTCAAGATATCAGCATGCAGCAGTATTTGTTAATGCAAGGCTTCATGTGTCTGGAGGGGCCCTTGGTGGTGGACGGATGGTAGAAGACTCATCAAGTGTTGCAGTTTTGGATACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACTAGTCCAAGGACGGGTAGATACAGTGCGGATGCAGCTGGTGGAGATGCCTTTGTTGAATTGACTCGGCGTTGTAGGCATGCAGCTGCTGCCATTGGTGACCTCATTTTTATTTATGGCGGTTTACGTGGAGGAGTATTGCTTGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAACTGCTGCTTCGCATGCTGCTGCTGCAGCGGCTGCATCTAATATACAAGCTGGGCGATTACCTGGACGATATGCATTTGTTGATGATAGGACGAGGCAAACAATGCCCGAAACGACTGCTGATGGTGCAGTTGTACTGGGAAATCCAGTTGCTCCCCCTATAAATGGCGACATTTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGATCTCGGCGAAGTAGCAAAGGTGTTGAGTATCTGGTCGAAGCATCAGCAGCGGAAGCTGAAGCTATCACTGCCACATTAGCTGCTGCCAAAGCCCGACAAATAAATGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCTGAGGCTACCCCAAGCGGAAAACCAATATCTTCCTTGATTAAGCCTGATTCTGTAGGGTCAAATAATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTTATTGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGGAGAGTCAGTTATGGGACACCAGAAAGTGCAACTGCAGCTAGAAAATTGTTAGATCGGCAGATGTCTATCAATAGCGTCCCAAAAAAGGTCATAGCCCACCTATTAAAGCCTCGTGGCTGGAAACCACCCCTTCACCGGCAATTTTTCTTAGATTGCAATGAAATTGCTGATCTTTGTGAAAGTGCAGAGAGGATATTTTCAAGCGAACCAAGTGTGTTACAACTTCGGGCACCGATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGTCTCTTTGATGAGTATGGTGCACCATCAACTGCCGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGCCAACACAGCCTGGAAACTATAACTCTTCTCCTTGCTCTGAAGGTGGAATATTCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCTGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGCGAGAGAGATGGAATTTGGGCATGGCATCGGATAAACCGTTTGTTTAATTGGCTTCCTCTGGCGGCTTTAATTGAGAAAAAAATTATTTGCATGCACGGGGGTATCGGTCGTTCAATAAATCATGTGGAACAGATTGAGAATATTCAGCGGCCAATTACGATGGAAGCAGGGTCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGACTGCGGCCGAATGCCAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTCCGTGCGCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATCTGATCACGCTTTTCTCAGCTACAAATTACTGTGGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCACCCGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCTCCGACACCAACTAGAGGTCGTCCTCAAGTAGCAAATGACCGAGGCTCACTTGCTTGGATATGA 3024 0.4835 MDVDSSMAPETDHDPVVQNHTTTPAPAAAMEGEQLGGQPSSGGGSPAQSPLQQQQQQAAAQVQQSPVVGPRLAPTYSVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAATGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPMPSAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAFVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNIQAGRLPGRYAFVDDRTRQTMPETTADGAVVLGNPVAPPINGDIYTDISTENAMLQGSRRSSKGVEYLVEASAAEAEAITATLAAAKARQINGEVELPDRDRGAEATPSGKPISSLIKPDSVGSNNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPLHRQFFLDCNEIADLCESAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYSNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1495 1007 Gene3D - 640 982 IPR029052 -
Glsi14g1495 1007 Pfam Calcineurin-like phosphoesterase 704 911 IPR004843 GO:0016787
Glsi14g1495 1007 SMART pp2a_7 676 960 IPR006186 GO:0016787
Glsi14g1495 1007 FunFam Serine/threonine-protein phosphatase 72 269 - -
Glsi14g1495 1007 FunFam Serine/threonine-protein phosphatase 273 473 - -
Glsi14g1495 1007 Gene3D - 200 458 IPR015915 GO:0005515
Glsi14g1495 1007 FunFam Serine/threonine-protein phosphatase 640 980 - -
Glsi14g1495 1007 CDD MPP_Bsu1_C 656 958 IPR041758 -
Glsi14g1495 1007 Pfam Kelch motif 335 380 IPR011498 GO:0005515
Glsi14g1495 1007 MobiDBLite consensus disorder prediction 984 1007 - -
Glsi14g1495 1007 MobiDBLite consensus disorder prediction 1 66 - -
Glsi14g1495 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1007 - -
Glsi14g1495 1007 MobiDBLite consensus disorder prediction 556 580 - -
Glsi14g1495 1007 SUPERFAMILY Metallo-dependent phosphatases 661 966 IPR029052 -
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 922 938 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 840 867 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 810 836 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 739 766 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 900 920 IPR006186 GO:0016787
Glsi14g1495 1007 PRINTS Serine/threonine phosphatase family signature 772 796 IPR006186 GO:0016787
Glsi14g1495 1007 MobiDBLite consensus disorder prediction 38 66 - -
Glsi14g1495 1007 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
Glsi14g1495 1007 PIRSF STPPP_BSU1 41 1007 IPR012391 GO:0004721|GO:0009742
Glsi14g1495 1007 Gene3D - 74 199 IPR015915 GO:0005515
Glsi14g1495 1007 ProSitePatterns Serine/threonine specific protein phosphatases signature. 773 778 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1495 Glsi-ChrGlsi14 15395057 15408219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1495 668 903 Calmodulin-binding Proteins AT5G63870 28.676 5.43e-25 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1495 14 15395057 15408219 Glsi04g0567 04 3874792 3893315 CCT