Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1489 ATGCCCTTGGATCCCTTGATCTGCAAGCTGCGGCGTATCCTTCTTGCATGGCTTCAGCGATCTCGTTCTGGTCAAGTATACTTTGTGAGGCGTCTTTCGTACAAGGATGTTAAAAGGGCAACAGATGGTTTTGAGAGAATCATTTATAGCAATTCTCTAGTTGCTGCATATACGGCAAAATTTCAAGATGGTGGTGTTTCTTTGGTAAAAGAGGTAAAATCTTTTGATCAAGGAAATGACATTTTCTACAGTGAAGTGCAATTCTTGGGGCAGTTGCATCATCGCCACCTTCTGGCTCTCAAAGGGTTTTCCGTGAGACACAAGAGACTGCTCATTTTTGACAACATAGAGAACGGAAGTTTAAAGGAGCATTTCAATGATCCCCTAAAGACTCCCTTAAATTGGAGGACAAGGCTACAGATAGCTATTGGCGTAGTGGCTGCCCTGGAATACTTGCTTCTCTTCATCGAACAACCATTATGTCATGTCTCTATCAGCTCTAGCAATATTATGTTAGATGAGAATTTTACAGCTAAACTATCTGATTTCGGCTTTCTTGCTTCTGGTGGAAACCCTATTATGATGCCATATTCAAAAGATTGCGTGGGGCAGAAAAGTGGTAACATAATATTCCAACTTGGAATGTTCATATTGGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCTGATCTAATCCAATGGATCCAAGAATCCCGCTTTTACAGTTCCATACATAAGATGATAGACCCTGATCTTGGAAACAATTATGATTCTAGGGAGCTTAAAAACCTTCTCGCTGTTGCAAAATTATGCATCAAATCAAGGGACAAGCCTGTATTTACAATCCCTCAGTTATTTCGGTATCTTCAACAGAAGGTAGATATTCCCCGTGACTAG 903 0.4097 MPLDPLICKLRRILLAWLQRSRSGQVYFVRRLSYKDVKRATDGFERIIYSNSLVAAYTAKFQDGGVSLVKEVKSFDQGNDIFYSEVQFLGQLHHRHLLALKGFSVRHKRLLIFDNIENGSLKEHFNDPLKTPLNWRTRLQIAIGVVAALEYLLLFIEQPLCHVSISSSNIMLDENFTAKLSDFGFLASGGNPIMMPYSKDCVGQKSGNIIFQLGMFILELVTGQSSEMEGSDLIQWIQESRFYSSIHKMIDPDLGNNYDSRELKNLLAVAKLCIKSRDKPVFTIPQLFRYLQQKVDIPRD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1489 300 Gene3D Phosphorylase Kinase; domain 1 16 114 - -
Glsi14g1489 300 Gene3D Transferase(Phosphotransferase) domain 1 210 299 - -
Glsi14g1489 300 FunFam probable receptor-like protein kinase At1g49730 210 299 - -
Glsi14g1489 300 SUPERFAMILY Protein kinase-like (PK-like) 25 268 IPR011009 -
Glsi14g1489 300 PANTHER OS01G0253100 PROTEIN 27 295 - -
Glsi14g1489 300 Pfam Protein tyrosine and serine/threonine kinase 69 186 IPR001245 GO:0004672|GO:0006468
Glsi14g1489 300 ProSiteProfiles Protein kinase domain profile. 12 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1489 300 FunFam Protein kinase superfamily protein 18 114 - -
Glsi14g1489 300 FunFam Protein kinase superfamily protein 116 206 - -
Glsi14g1489 300 Gene3D Transferase(Phosphotransferase) domain 1 116 203 - -
Glsi14g1489 300 SMART tyrkin_6 47 267 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1489 Glsi-ChrGlsi14 15357881 15361432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1489 6 296 Receptor kinase-like Gene Family AT3G19300 34.494 8.73e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Glsi14g1489 PK_Tyr_Ser-Thr 8.8e-15 CL0016