Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1486 ATGAATGCAAGGGAGGAAAAGATGTCCCATCGGTCATCACTGAGCAAACGGCGCGAGAATTTTCCCCGTGATCTGCCTATACGTCTACTGATCTCCTCAGGAACGTCACAAATAAAAAAGAAAAGAAAAATGTCAATGGACATGATGGCAACCGAACGTGTTTATTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCATGCAACAGTTTGCTTACCATAGTGACGGTAAGATGTGGGCATTGTGCCAATTTGTTATCAGTTAATATGGGAGCATCACTCCAAACATTTCCTCCTCAAGACCTTCAGGTATTTCAGAAACAGCACATAAGCTTTGAAGAATCAAGCAAAAAAGAAGTGGGATCATCTTCAAAATGCAACAAATTAGATGCATTTGAGTCTGTAGAGCATGAGCAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGTGTCCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTTAGCACAGCAGCCAAAAACTGGGCACATTTCCCTCATATTCACTTTGGGTTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGGGGAGGGAACTCAAAAGTCTCAAGGATTCCACTGA 681 0.4347 MNAREEKMSHRSSLSKRRENFPRDLPIRLLISSGTSQIKKKRKMSMDMMATERVYYVHCNFCNTILAVSVPCNSLLTIVTVRCGHCANLLSVNMGASLQTFPPQDLQVFQKQHISFEESSKKEVGSSSKCNKLDAFESVEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSQGFH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1486 226 CDD HMG-box_SF 157 193 - -
Glsi14g1486 226 PANTHER PROTEIN YABBY 6-RELATED 44 213 IPR006780 GO:0007275
Glsi14g1486 226 SUPERFAMILY HMG-box 147 196 IPR036910 -
Glsi14g1486 226 Gene3D High mobility group box domain 140 200 IPR036910 -
Glsi14g1486 226 FunFam Axial regulator YABBY 148 218 - -
Glsi14g1486 226 Pfam YABBY protein 50 203 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1486 Glsi-ChrGlsi14 15326749 15335041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1486 44 226 C2C2-YABBY Transcription Factor Family AT1G08465 65.957 6.61e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Glsi14g1486 YABBY 4.1e-71 CL0114