Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1483 ATGGAGGGTCCTGATATGGAAGGGAATGAGAAGTCTGATGTGCATTTGACCTCAGCCGTTGCTTTTGTGGAAGGAGGAATCCAGGATGCTTGTGATGATGCTTGCAGCATATGTCTTGAAGCCTTCTGTGACAGCGATCCTTCGACAGTGACAAGTTGCAAGCACGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAAAGAAGCTCCCAGTGCCCCATGTGTTGGCAACCCATCAGTCTTAAAGATCCAACCAGCCAGGAATTGCTCGAGGCAGTGGAAAGAGAGAGGAACATTAGGATCAATCCTACTAGAAATGCCACAATATTTCATCATCCAACTCTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGTGCAAATGATGCTGATCTTGAAGAGCGTATAATCCAACACCTAGCTGCTGCTGCTGCAATGGGGCGGGCCCGTCACATTGCTAGAAGGGAAAGCCAGAGAAACAGGTCATCAGCACAAGGTCGTCCACATTTTTTGGTTTTTTCAACTCATCCTAATTCACCTCCCTTGGCTCCTGCCTCTCCAACTCATGGGGAAGATTCTGAACCAACTTCTGCAATCTCTGTTTCCACTCTCTCTCCAACTCCTGCCACCGGGGAAGAATCATCACAGATGACTTCTGTTCCTCCTGTCCAAGCAGACCAGGTTTCTGCTTCAGGATCTGGATCTGCTGCTCTTGCTGCTGATCACCAAGGATCATCTTACAACAGTAGGAGATCCCCAAGCCAGGCATCTCCAAGTAGTCAAGACAGAGCAGGGCCATCAGAATTACAATCATTTTCAGAATCTCTGAAGTCTAGATTAAATGCAGTGTCAATGAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGTTGGAAGGAGAGATGGTTCTCTCGTAACAGCTCTATGACTGATCTGGGATCTGAAGTTAGACGAGAGGTAAATGCAGGGATTGCGACTGTCTCACGCATGATGGAACGTCTGGAAACCAGAGACGGCAATAGAACCAGTAGCAATTCTGCTCCAAGTCATTCAGAAGATGGTTCAGTTGCAGGATCAAATGACCAGCATTTATCAGATACTGAAGAGCACGATTTGCATAAATTCTGGACTGTATTTTGTCTGAAAGGTAGGAATAGACTTGCCCATTGCTGCATATAA 1179 0.4606 MEGPDMEGNEKSDVHLTSAVAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNIRINPTRNATIFHHPTLGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARRESQRNRSSAQGRPHFLVFSTHPNSPPLAPASPTHGEDSEPTSAISVSTLSPTPATGEESSQMTSVPPVQADQVSASGSGSAALAADHQGSSYNSRRSPSQASPSSQDRAGPSELQSFSESLKSRLNAVSMRYKESISKSTRGWKERWFSRNSSMTDLGSEVRREVNAGIATVSRMMERLETRDGNRTSSNSAPSHSEDGSVAGSNDQHLSDTEEHDLHKFWTVFCLKGRNRLAHCCI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1483 392 MobiDBLite consensus disorder prediction 340 362 - -
Glsi14g1483 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 84 IPR013083 -
Glsi14g1483 392 MobiDBLite consensus disorder prediction 336 364 - -
Glsi14g1483 392 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Glsi14g1483 392 MobiDBLite consensus disorder prediction 190 273 - -
Glsi14g1483 392 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 21 84 - -
Glsi14g1483 392 Pfam Ring finger domain 34 75 IPR001841 -
Glsi14g1483 392 SUPERFAMILY RING/U-box 28 83 - -
Glsi14g1483 392 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Glsi14g1483 392 SMART ring_2 35 75 IPR001841 -
Glsi14g1483 392 MobiDBLite consensus disorder prediction 170 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1483 Glsi-ChrGlsi14 15286237 15290533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1483 5 75 C3H Transcription Factor Family AT5G41350 43.662 4.55e-11 60.5