Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1481 ATGCATAACGGTATGAATATGATGGATCCTGATTTGATCAGAATAGCTCAGGAGCAGATGAGTCGCATGTCACCCGCCGAGTTGGCGCGGATCCAACAGCAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCAGAAAGCATGAAGAACATGAGGGTTGAAGACCTTAAACTTGCTGCAGAACAGTTAAAGCATTCCTGTCCAGAAGAAATGGCTAAGATTGGTGGGAAGATGGCTAATGCAACACCTGAAGAAATAGCAGCCATGAGAACCCGTGTTGATGCCCAGATCAAATATGAATTGAGTGCAGCTGAGATGTTGAAGAAGCAGGTGGGTAGTAATAGTAAAGGGAATGAATTTCACAGCCAAGGAAGGTTCCATAATGCTATGCAGAAGTACCTACTTGCTAAGCAAAACATTAAAGACATTCCATCTTCCCAAAGTAGAAAGCTTATTTTGGCTTGCTCACTCAACTTAATGTCCTGTTACTTGAAGACAAGGCAGTATGATGAATGCATAAAAGAAGGATCTGAGGTTTTGGCATATGATGCTAAAAATCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAAATAGGTCAACTAAAGGATGCCGTGGCTGATTTGAGCATGGCACTTGAAGTGTCCCCTGATGATGATACAATTGAGGAGCTTTTAAGGGACACCAAGGATGTGTTGACAAAGGAAGGTGGATTAGTAATTGAAGAAATAACTGAAGAAGTTGACAGTGTGCCTTCTGGAAACTATGGAAGCTCATCTATTGAAAACACAGTGTCTCAACCAAAAAAATCCGAGGACTCTTCTAAGAGTTGCAGTACAGCAGTTAACGAAGGAAATCTGAAAACTAATACGGAGAGTTTAAATACATTGAAAAATGATCCAGAAGCTGCCAGTCAAGGTATTTCAGCTAATCTTTCATCAACTAGTATTTGGTTATCTATGGGTCTTGTTGCTTTCCTTTTCACCTCTAGCAATTTCTTCAGCCCCACACCTGTGAGCTGCACATTAGATTCATTTTTGCAGTTGGAGTTGAACATATCGTTCCAACATTTCATTTCAAATGCTGATCCTGCTACTCTGGCTTCTTTGAATTCCGGTCAATCCAGAGATGTGTCTCCTGATATTATGAGAACTGCCTCAAATATGATCAGCAAGATGCCACCTGATGAACTTCAAAAAATGCTTGACATGGCTTCTTCATTTCAGGGGCACAACCCATTTTTAAGAGGGAGTTCCCCTGATTCTACTTTCAACCCTGGATCAATTCCTAATATGACACCTGACATGTTTAAAAAAGCAAGTGATATGATAAGAAAAATGTCACCAGAGGATCTTCAGAATATGTTTGATATGGAATCCTCATTGAAAGGGAAAGAATCTATTCCATATTTTGCTGCTGTAGACAAGAATGAGAGTAATGCCTCTCTGTCAAACTTATCATACTCAAGTGCTGATGGAACTGATGCTTTTGGTGAATCTTTTTCTTCTCACAATGAATTTTCAAATGTGAGAAATGCTTCTCAGTCAAATTTCCCGTCCTCAAGCACTGACTTTCAAGAACAGATGAAAGATCCAACTATGCGACAGATGTTCTCATCAATGGTTAAAAACATGAGCCCAGAAATGATGGCAAACATGGGCGAACAATTTGGTTTTAAACTTTCACAAGAAGATGCAGCAAAAGCTCAACAGGCCATTTCATCATTATCACTTGAGGACTTGGATAAAATGATGCGTTGGGCAAATAGGATCCAAAGAGGGGCTGAAGGTGTAAAAAAGACGAAGAACTGTCTGCTAGGCAAACCTGGTATGATCTTGGCAATATGCATGCTCATTTTGGCTGTGATTCTTCATCGACTGGGCTTCGTTGGTGGCTAG 1905 0.4058 MHNGMNMMDPDLIRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMRVEDLKLAAEQLKHSCPEEMAKIGGKMANATPEEIAAMRTRVDAQIKYELSAAEMLKKQVGSNSKGNEFHSQGRFHNAMQKYLLAKQNIKDIPSSQSRKLILACSLNLMSCYLKTRQYDECIKEGSEVLAYDAKNLKALYRRGQAYKEIGQLKDAVADLSMALEVSPDDDTIEELLRDTKDVLTKEGGLVIEEITEEVDSVPSGNYGSSSIENTVSQPKKSEDSSKSCSTAVNEGNLKTNTESLNTLKNDPEAASQGISANLSSTSIWLSMGLVAFLFTSSNFFSPTPVSCTLDSFLQLELNISFQHFISNADPATLASLNSGQSRDVSPDIMRTASNMISKMPPDELQKMLDMASSFQGHNPFLRGSSPDSTFNPGSIPNMTPDMFKKASDMIRKMSPEDLQNMFDMESSLKGKESIPYFAAVDKNESNASLSNLSYSSADGTDAFGESFSSHNEFSNVRNASQSNFPSSSTDFQEQMKDPTMRQMFSSMVKNMSPEMMANMGEQFGFKLSQEDAAKAQQAISSLSLEDLDKMMRWANRIQRGAEGVKKTKNCLLGKPGMILAICMLILAVILHRLGFVGG 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1481 634 MobiDBLite consensus disorder prediction 252 300 - -
Glsi14g1481 634 SUPERFAMILY TPR-like 116 228 IPR011990 GO:0005515
Glsi14g1481 634 ProSiteProfiles TPR repeat profile. 188 221 IPR019734 GO:0005515
Glsi14g1481 634 SMART tpr_5 188 221 IPR019734 GO:0005515
Glsi14g1481 634 SMART tpr_5 154 187 IPR019734 GO:0005515
Glsi14g1481 634 Gene3D Tetratricopeptide repeat domain 98 239 IPR011990 GO:0005515
Glsi14g1481 634 MobiDBLite consensus disorder prediction 253 300 - -
Glsi14g1481 634 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 306 - -
Glsi14g1481 634 ProSiteProfiles TPR repeat region circular profile. 188 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1481 Glsi-ChrGlsi14 15276159 15282196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1481 100 224 Calmodulin-binding Proteins AT5G48570 29.771 3.64e-13 70.5