Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1465 ATGCATAGAATGATCGGCGACAACAACAACAACGACGACGAGGGAGGGAAGCGGAAAGACAGGATGAAGAAAGGGCCATGGACGGCAGCAGAAGATGCGATGTTGATAAAGTACGTGAACAAGTACGGGGAGGGCAACTGGAACTCTGTGCACAAGAATTCTGGGCTGCCTCGTTGTGGTAAAAGCTGCAGGCTCAGATGGGCCAATCACCTAAGGCCTAATCTCAGGAAAGACGCTTTTTCTCTATATGAACAACAACTCATCGTCCACCTTCACTCTAAGATCGGAAACAAATGGGCTCGAATGGCTGCCCACGTACTTCCTCTGCTGCTTTCCTCTATATATAAGCTTCTCGTTTTTATGGTCATGGTCTTCCTGAATGTCAACGTGGTTTCTGTGCAATCAAGTGGGTTTTGA 417 0.4772 MHRMIGDNNNNDDEGGKRKDRMKKGPWTAAEDAMLIKYVNKYGEGNWNSVHKNSGLPRCGKSCRLRWANHLRPNLRKDAFSLYEQQLIVHLHSKIGNKWARMAAHVLPLLLSSIYKLLVFMVMVFLNVNVVSVQSSGF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1465 138 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Glsi14g1465 138 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Glsi14g1465 138 SMART sant 76 121 IPR001005 -
Glsi14g1465 138 SMART sant 23 73 IPR001005 -
Glsi14g1465 138 CDD SANT 26 71 IPR001005 -
Glsi14g1465 138 FunFam MYB-related transcription factor 23 76 - -
Glsi14g1465 138 SUPERFAMILY Homeodomain-like 21 105 IPR009057 -
Glsi14g1465 138 Gene3D - 23 76 - -
Glsi14g1465 138 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Glsi14g1465 138 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 105 - -
Glsi14g1465 138 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1465 Glsi-ChrGlsi14 15192621 15193037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1465 12 106 MYB Transcription Factor Family AT5G06100 66.000 6.54e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi14g1465 Myb_DNA-binding 1.8e-13 CL0123