Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1450 ATGAAACAGTCTATGGGTGTGCCTCTAATGATATGGATTTGGGTAATCCTTAGTGGTATTGCTCACTGCCAAAGGCCTGCGGCTGTGAATATTGGTGCGGTTTTCACTTTTGATTCGGTCATTGGTAAAGCTGCAAAGGCGGCGATGGAAATGGCCGTCTCTGACGTCAATGCAGACCCGAGAGTTCTTAATGGGACGAAACTAAAGTTGATAATGGAGGATGCCAGTTGCAGCGTCTTTCTGGGGTCGATTGGAGCGTTTCGGGCACTTGAGAAAGGGGTTGCAGCCATAATCGGCCCACAGTCATCTGCCATAGCTCATGTGATTTCTCAAATTGCTAATGGTCTCCAAGTCCCTCTAGTTTCATATGCTGCAACAGATCCAACCCTGTCCGCCCTCCAGTTTCCTTTCTTTTTTCGTACTGTACCAGGTGACTCTGATCAAATGACTGCAATAGCTGACTTAATTGACTTTTATGGATGGAAAGAGGTCATTGCCGTCTTCTTGGATGATGATTATGGAAGGAATGGAATATCTGCTCTGGGTGATGAACTTGAAAAACGAAGGTTGAGAATTGCTCATAAATTACCTTTGAGCGTTCAGTTTGATCCGGATGAAATTGCTTACTTGCTCAATCAATCCAAAGTGTTTGGTCCTCGTGTCTATGTTGTTCATGTCAACCTAGATCCCAGATTAAGAATTTTTACCATAGCCCATCAACTTCAAATGATGGCTAGCGACTATGTCTGGCTTGCCACTGATTGGCTCTCTGCTACCATAGATTCTTTCTCCCCAGAGAATCAGACTTCTCTCAGTGTCCTGCAAGGGGTGGTTGGGCTTCGTCACCACATTCCAGATTCTCTCCAGAAAAGAACTTTTGTTTCTCAGTGGAGAAAAATGCAGAACCAAAGTGCAGCAATTATTGGCTTGAACACTTATGGATTTTATGCTTATGATTCAATTTGGACCATTGCACGTTCAATTGATAAGTTCATCGAAGTACACAAAAATATTACATTCTCTGTCAATAATAACATTAAATTACTTCATACAGAAGCATCTTATATTCAGCTTGACAAGCTGAAAGTCTTTGCCGGGGGATCTGATCTGATCAACATATTATTACAATCAAATTTTACTGGAGTGAGTGGCCAAGTTCAATTCAATTCAAACAGGAATATCATAAGTGATGGCTATGATGTTATCAATATCAATCAGATGAAAATTATCAGGGTTGGATATTGGTCTCATACTTCAGGATTTTCTGTTGTACCTCCTGAAACTCTTAATAGGAATGAACGTGGCAGGTTTTCCCAAGATCAGAATCTTAACAACATGACTTGGCCAGGTGGAAAGACAGGAAGACCACGTGGCTGGGTGATTGCTGATAGTGCAAGACCACTGAGAATTGGAGTGCCCAGGAGAGCAAGTTTTGTTGAATTCGTCACTGAACTGTCTGGTAGTCATCATATTCAAGGATTCTGCATTGATGTCTTCAAGAAAGCACTGGAGTTCATACCATATAATGTTCCTTATGTATTTCATCCTTTTGGGAATGGTCAATCAAATCCCAATTATGATGCACTTGTGAAGATGATTGCTGAAGATGTATTTGATGCTGTTGTTGGAGACATAGCAATTGTTACAAACCGTACAAGGATTGTGGATTTTTCTCAGCCTTTTGCATCAGCTGGCCTTGTAATAGTGGCTCCAATCAAGAATGCAAAATCAAGTGCTTGGGTATTTCTCAAACCATTTACAGCAGATATGTGGTGTGTCACTGCAGCTTCATTTATAATGATTGGATTAGTTATATGGGCTCTTGAGCATCGAGTCAATGACGATTTCCGTGGTCCTCCAAAGAGACAACTCGTGACCATGTTTATGTTCAGCCTCTCAACACTGTTTAAGACAAATCAGGAAAATACAGTAAGCTCACTTGGTCGAATGGTGATGATAGTGTGGCTTTTTCTATTGATGGTGATCACTGCTAGCTATACTGCAAGCTTGACTTCAATTCTTACAGTGGAACAGCTTTCATCACCCATCACAGGAATTGATAGCTTAATTGCAAGTAACTGGCCTATAGGGTACCAAGTAGGGTCATTTGCTTACAACTATCTGACAGATAGTCTTTATGTACCAAGATCAAGACTTGTTTCTTTAGGTTCCCCGGAGGAATATGCAAGAGCTCTGCAGAAAGGGCCTACTGGTGGAGGGGTGGCAGCTATCATAGATGAGCTTCCATATGTCGAGTTATTCCTGTCAACACAAACTGATTTTGGTATTATTGGACAGCCATTTACCAGAAACAGTTGGGGATTTGCTTTTCAAAGAGAGTCTCCACTTGCCCTTGACATGTCTACAGCAATTTTGAAACTTAGTGAGAATGGAGATCTTCAGAAGATACGAGAGAAGTGGTTCTGTAAGATGGGTTGTCCTGACGGAAGGAAAAGCAACTCTGAGCCTAACCAACTTCATTTGATTAGCTTTTGGGGTCTGTATCTCTCGTGTGGTGTTGTCACTCTGGCTGCTCTTCTGGTGTTTCTGCTGCTAACTATTCGCCAATATGTCCGCTATAAACAAAAGCGGAGGGATATCTCTTCTTCATCCATGGAGACATCAGAAAGTCATTGTTCCCAAGTTATTTATAGCTTCTTTAATTTCATTGATAAAAAGGAAGAAGCCATCAAGAAAATGTTCACTCACTCTGACAATCCACAACAGTAG 2730 0.4147 MKQSMGVPLMIWIWVILSGIAHCQRPAAVNIGAVFTFDSVIGKAAKAAMEMAVSDVNADPRVLNGTKLKLIMEDASCSVFLGSIGAFRALEKGVAAIIGPQSSAIAHVISQIANGLQVPLVSYAATDPTLSALQFPFFFRTVPGDSDQMTAIADLIDFYGWKEVIAVFLDDDYGRNGISALGDELEKRRLRIAHKLPLSVQFDPDEIAYLLNQSKVFGPRVYVVHVNLDPRLRIFTIAHQLQMMASDYVWLATDWLSATIDSFSPENQTSLSVLQGVVGLRHHIPDSLQKRTFVSQWRKMQNQSAAIIGLNTYGFYAYDSIWTIARSIDKFIEVHKNITFSVNNNIKLLHTEASYIQLDKLKVFAGGSDLINILLQSNFTGVSGQVQFNSNRNIISDGYDVININQMKIIRVGYWSHTSGFSVVPPETLNRNERGRFSQDQNLNNMTWPGGKTGRPRGWVIADSARPLRIGVPRRASFVEFVTELSGSHHIQGFCIDVFKKALEFIPYNVPYVFHPFGNGQSNPNYDALVKMIAEDVFDAVVGDIAIVTNRTRIVDFSQPFASAGLVIVAPIKNAKSSAWVFLKPFTADMWCVTAASFIMIGLVIWALEHRVNDDFRGPPKRQLVTMFMFSLSTLFKTNQENTVSSLGRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYNYLTDSLYVPRSRLVSLGSPEEYARALQKGPTGGGVAAIIDELPYVELFLSTQTDFGIIGQPFTRNSWGFAFQRESPLALDMSTAILKLSENGDLQKIREKWFCKMGCPDGRKSNSEPNQLHLISFWGLYLSCGVVTLAALLVFLLLTIRQYVRYKQKRRDISSSSMETSESHCSQVIYSFFNFIDKKEEAIKKMFTHSDNPQQ 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1450 909 CDD GluR_Plant 466 808 - -
Glsi14g1450 909 Gene3D - 579 707 - -
Glsi14g1450 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Glsi14g1450 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Glsi14g1450 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Glsi14g1450 909 FunFam Glutamate receptor 144 305 - -
Glsi14g1450 909 SUPERFAMILY Periplasmic binding protein-like I 21 450 IPR028082 -
Glsi14g1450 909 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Glsi14g1450 909 Gene3D - 756 815 - -
Glsi14g1450 909 Pfam Bacterial extracellular solute-binding proteins, family 3 480 808 IPR001638 -
Glsi14g1450 909 Gene3D - 461 578 - -
Glsi14g1450 909 FunFam Glutamate receptor 705 812 - -
Glsi14g1450 909 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Glsi14g1450 909 Gene3D - 47 397 - -
Glsi14g1450 909 FunFam Glutamate receptor 463 579 - -
Glsi14g1450 909 Pfam Receptor family ligand binding region 46 405 IPR001828 -
Glsi14g1450 909 Gene3D - 144 421 - -
Glsi14g1450 909 FunFam Glutamate receptor 579 716 - -
Glsi14g1450 909 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Glsi14g1450 909 SUPERFAMILY Periplasmic binding protein-like II 447 808 - -
Glsi14g1450 909 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 869 IPR015683 -
Glsi14g1450 909 PIRSF IGluLR_plant 1 909 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1450 Glsi-ChrGlsi14 15068520 15073203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1450 7 906 Ion Channels AT2G32400 57.901 0.0 1062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0623 04 4309660 4316407 Glsi14g1450 14 15068520 15073203 CCT
Glsi14g1450 14 15068520 15073203 Glsi14g1450 14 15068520 15073203 ECH