Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1449 ATGGCCAGGACATTATTCCTCTTGGTTTTCTGCTTATGGATTCCCATAGAAGTTGTGGGTATGACAGAAAATACCAAAATAAATAATACTGTTCCTTCAAGACCTAGTGTTGTGAGAATTGGAGCCCTGTTTACTTTTGATTCGGTCATTGAAAGATCTGCTAAACCTGTAATTTTGGCTGCCATTGATGATGTTAATTCTAATTCAAGCATTCTCAGTGGCATTAAACTGGAAGTTATTCTACATGATACAAGCTGCAGTGGATTTCTTGGAATAATGGGAGCTCTGCAGTTGATGGAGAATGATGTGGTTGCTGCTGTTGGTCCACAGTCCTCTGGAATAGCTCACGTCATCTCTCATGTCGTGAATGAATTCCATGTACCACTTATTTCATTCGGGGCAACTGATCCTATTCTTTCTTCTCTGCAGTACCCCTATTTTATCCGCACTTCCCAGAATGACTATTTTCAGATGTATGCAATAGCAGACTTGATTGAACATTACGGATGGAGGGAGGTAGTTTCCATTTTCGAGGATGATGATAATGGAAGGAATGAAATTTCTATACTGGGTGATGCCCTGGCAAATAAACGTGCCAAGATCTCTTATAAGGCTGCCTTCCCTCCCGGCGCTGCCAAAAGTAATATAAGTGACTTGTTAAATAGAGTAAATTTAAAGGAATCACGGGTCTATGTTCTGCATGTAAATCCTGATTCTGGATTGGCAATATTTTCTATTGCCATGAAGCTAGGAACGATGAGCAGTGGCTATGTTTGTATTGCAACAGATTGGCTTCCTTCAGTGCTAGATTCATCAGAGCCATCCGAACCTGACACGATGAATCTTTTACAAGGGGTTGTTGCTTTTCCACATGCTCAGCATTTTTTTCTCGGTGAAGGTGGAAATATATCCTTCTCCAATGACCCTAGGCCGCATGACACAAATGGAAGCATGTTGCATTTAGCATCACTCCAGACTTTTGATGGTGGCCCACAGTTTCTCCAGACAATCCTGAGAATGAACGTCACTGGGGTCTCTTGTCCCCGTGGTGGCAGTGGGAGCATCCATCTGCCTTTTGATGTGAACGGTAAACGAAATTTCGAAGCAGCTGAGGTCAACAGAGGTCTCTCGTCTTTGTTTGCGAAAGTGACTCATTGTTTAGGCCCTGATTTTTCTCTGAAAGCTCTTGTAACTTGTAAGACCAGTAACTTGGTTGGATTCTTACTCATCATGAAGTCGAGGTTGGGTGCTTGTCGCCGGGGCATGATTCCTGGATTTGTTCAATTTATGGGTGTGCCTCTAATGATTTGGATTTGGGCAATCCTCAGTGGTATTGCTCACTGCCCAAGGCCTGCGGCTGTGAATATTGGTGCGGTTTTCACTTTTGATTCGGTCATTGGTAAAGCTGCAAAGGCGGCGATGGAAATGGCTGTCTCTGACGTCAATGCAGACCCGAGAGTTCTTAATGGGATGAAACTAAAGTTGATAATGGAGGATGCCAGTTGCAACGTCTTTCTGGGGTCGATTGGAGCGTTTCGGGCACTTGAGAAAGGGGTTGCAGCCATAATCGGCCCACAGTCATCTGCCATAGCTCATGTGATTTCTCAAATTGCTAATGGTCTCCAAGTCCCTCTAGTTTCATATGCTGCAACAGATCCAACCCTGTCTGCCCTCCAGTTTCCTTTCTTTTTTCGTACTGTACCAGGTGACTCTGATCAAATGACTGCAATAGCTGACTTAATTGACTTTTATGGATGGAAAGAGTTTGATCCGGATGAAATTGCTTACTTGCTCAATCAATCCAAAGTGTTTGGTCCTCGTGTCTATGTTGTTCATGTCAACCTAGATCCCAGATTAAGAATTTTTACCATAGCCCACCAACTTCAAATGATGGCTAGCGACTATGTCTGGCTTGCCACTGATTGA 1926 0.4351 MARTLFLLVFCLWIPIEVVGMTENTKINNTVPSRPSVVRIGALFTFDSVIERSAKPVILAAIDDVNSNSSILSGIKLEVILHDTSCSGFLGIMGALQLMENDVVAAVGPQSSGIAHVISHVVNEFHVPLISFGATDPILSSLQYPYFIRTSQNDYFQMYAIADLIEHYGWREVVSIFEDDDNGRNEISILGDALANKRAKISYKAAFPPGAAKSNISDLLNRVNLKESRVYVLHVNPDSGLAIFSIAMKLGTMSSGYVCIATDWLPSVLDSSEPSEPDTMNLLQGVVAFPHAQHFFLGEGGNISFSNDPRPHDTNGSMLHLASLQTFDGGPQFLQTILRMNVTGVSCPRGGSGSIHLPFDVNGKRNFEAAEVNRGLSSLFAKVTHCLGPDFSLKALVTCKTSNLVGFLLIMKSRLGACRRGMIPGFVQFMGVPLMIWIWAILSGIAHCPRPAAVNIGAVFTFDSVIGKAAKAAMEMAVSDVNADPRVLNGMKLKLIMEDASCNVFLGSIGAFRALEKGVAAIIGPQSSAIAHVISQIANGLQVPLVSYAATDPTLSALQFPFFFRTVPGDSDQMTAIADLIDFYGWKEFDPDEIAYLLNQSKVFGPRVYVVHVNLDPRLRIFTIAHQLQMMASDYVWLATD 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1449 641 SUPERFAMILY Periplasmic binding protein-like I 33 367 IPR028082 -
Glsi14g1449 641 Gene3D - 452 590 - -
Glsi14g1449 641 Gene3D - 591 641 - -
Glsi14g1449 641 PANTHER OS06G0188250 PROTEIN 445 588 - -
Glsi14g1449 641 Gene3D - 164 287 - -
Glsi14g1449 641 SUPERFAMILY Periplasmic binding protein-like I 446 641 IPR028082 -
Glsi14g1449 641 Pfam Receptor family ligand binding region 471 589 IPR001828 -
Glsi14g1449 641 Pfam Receptor family ligand binding region 55 289 IPR001828 -
Glsi14g1449 641 Gene3D - 37 163 - -
Glsi14g1449 641 FunFam Glutamate receptor 153 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1449 Glsi-ChrGlsi14 15041731 15054378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1449 450 641 Ion Channels AT1G05200 46.522 9.65e-55 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1449 14 15041731 15054378 Glsi04g0623 04 4309660 4316407 CCT
Glsi14g1449 14 15041731 15054378 Glsi14g1449 14 15041731 15054378 ECH