Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1448 ATGCAGAACCAAAGTGCAGCAAGTATTGGCTTGAACACTTACGGATTTTATGCTTATGATTCAATTTGGACCGTTGCACGTTCAATTGATAAGTTCATCGAAGTACACAAAAATATTACATTCTCTGTCAATAATAGCACTAAATTACTTCATACAGAAGCAGCTAATATTCAGCTTGACAAGCTCAAAGTCTTTGCTGGGGGACCTGATCTGATCAACATATTATTACAATCAAATTTTACTGGTGTGAGTGGTCAAGTTCAATTCAATTCAAACAGGAATATCATAAGTGGCGGCTATGATGTTATCAATATCAATCAGATGGAAATTATCAGGGTTGGATATTGGTCTCATACTTCAGGATTTTCCGTTGTACCTCCTGAAACTCTTAATAGGAAAGAACATGGCAGGTTTTCCCAAGACCAGAAGCTTAACATGACTTGGCCAGGTGGAAAGACAGGAAGACCTCGTGGCTGGGTGATTGCTGATAGTGCAGGACCACTGAGAATTGGAGTGCCCAGGAGAGCAAAGCTTTTGCTGAAGAACTTTCTTAATGACTTGTATATCTTAATGGTATTTGATGCTGTTGTTGGAGACATAGCAATTGTGGCGAACCGTACAAGGATTGTGGATTTTTCTCAACCTTTTGCATCAGCTGGCCTTGTAATAGTGGCTCCAATCAAGAATGCAAAATCAAGTGTTTGGGTATTTTTCAAACCATTTACAGCAGATATGTGGTGTGTCACTGCAGCTTCATTTATGATGATTGGAGTAGTTATATGGGTTCTTGAGCATCGAGTCAATGACGATTTCCGTGGTCCTCCTAAGAGACAACTTGTGACTATGTTTATATTCAGCCTCTCAACACTGTTTAAGACAAATCGTAAGGAAACTTTTGGCTTTAAAGTCTACCTACTTGATTATAGTGGTGAAATCATGACATTGGTTGGATCTGCATTACACTTCAATTTGACAAATTTTCACTTTGTCATGAATTCAGAGGAAAATACAGTAAGCTCACTTGGTCGAATGGTGATGATAGTGTGGCTTTTTCTATTGATGGTGATCACTGCTAGCTATACTGCAAGCTTGACTTCAATTCTTACAGTGGAACAGCTTTCGTCACCCATCACAGGAATTGATAGCTTAATTGCAAGTAACTGGCCTATAGGGTACCAGGTAGGGTCATTTGCTTACAACTATCTGACTGATAGTCTTTATGTGCCAAGATCAAGACTTGTTTCTTTAGGTTCCTCGGGGGAATATGCAAGAGCTCTGCAGAAAGGACCTACTGGTGGAGGGGTGGCAGCTATCATAGATGAGCTTCCATATGTCGAGTTATTCCTGTCAACACAAACTGATTTTGGTATTATTGGACAGCCATTTACCAGAAGCAGTTGGGGATTTGCTTTTCAAAGAGAGTCTCGTCTTGCCCTTGACATGTCTACAGCAATTTTGAAACTTGGTGAGAATGGAGATCTTCAGAAGATACGAGAGAAGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGGAAAGGCAACTATGAGCCTAACCGACTTCATTTGATTAGCTTTTGGGGTCTTTATCTCTCGTGTGGTGTTGTCACCCTGGCTGCTGTTCTGGTGTTTCTGCTGCTAACAATTCGCCAATATGTCCGCTATAAACGAAGGCAGAGGGATATCTCTTCTTCATCCATGGAGACATCAGAAAGTCATTGTTCCCAGAATTTTGATAAAGGTGGGTTAAGAAATTGGCTTTATGATAGAGCTTTTCCCAAATTGGAGGCCCTCTTGATTACAAGGCACGGCAGTTTGGCTATGGCCAGGACATTATTCCTCTTGGTTTTCTGCTTATGGATTCCCACAGAAGTTATGGGTAGGACAGGAAATACCCAAATAAATAATACTGTTCCTTCAAGACCTAGTGTTGTGAGAATTGGAGCCCTGTTTACTTTTGATTCGGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCCATCGATGATGTTAATTCTAATACAAGCATTCTCAGCGGCATTAAACTGGAAGTTATTCTACACGATACAAGCTGCAGTGGATTTCTTGGAATAATGGGAGCTCTGCAGTTGATGGAGAATGATGTGGTTGCTGCTGTTGGTCCACAGTCCTCTGGAATAGCTCATGTCATCTCTCACGTCGTGAATGAACTCCATGTACCACTTATTTCATTCGGGGCAACTGATCCTGTTCTTTCTGCTCTGCAGTACCCCTATTTTATCCGCACTACCCAGAATGACTATTTTCAGATGTATGCAATAGCAGACTTGATTGAACATTACGGATGGAGGGAGGTAGTTGCCATTTTTGTGGATGATGATAATGGAAGGAATGGAATTTCTATACTGGGCGATGCCCTGGCAAATAAACGTGCCAAGATCTCTTATAAGGCTGCCTTCCCTCCCGGAGCTGCCAAAAGTAATATAAGTGACTTGTTAAATAGAGTAAATTTAAAGGAATCGCGGGTCTATGTTCTGCATGTAAATCCTGATTCTGGTTTGGCAATATTTTCTATTGCCAAGAAGCTAGGGATGATGAGCAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTACAGTGCTAGATTCATCAGAGCCATCCAAACCTGACACAATGAATCTTTTACAAGGGGTTGTTGCTTTTCGTCATCACACTCCTGATACGGATCTCAAAAAGACTCTTATCACTAAGTTGAAAAACCAAAAAGACAATAAAACTGCTGGCTTCAATTCTTATGCATTATATGCATATGATTCTATCTGGCTAGCAGCACATGCTCTGCATGTTTTTCTCAGTGAAGGTGGAAATATATCCTTCTCCAATGACCCTAGGCTGCATGACACAAGTGGAAGCATGTTGCATTTAGCATCACTCCGGACTTTTGATGGTGGCCCACTGTTTCACCAGACAATCCTGAGAATGAATTTCACTGGTGTGAGTGGTCAAATTCAGTTTGATATGGAAAAGAATTTGATTCATCCAGCATATGATATTCTAAACATTGGTGGATCTGGACCCCGTATAATCGGTTATTGGTCTAATTACTCTGGTCTGTCTGATGTAGCTCCTGAAACTTTATATACAAAACCTCGCAACAGTTCCACTGGCAATAAACGACTGCACAGTGTGATATGGCCAGGAGAGATTACTACCACACCCAGGGGATGGGTATTCCCCAATAATGGAAAGCCATTGCGAATAGCAGTGCCGAACCGAATAAGCTACTTGGAGTTCGTTGGCAAGACCAAAAACCCCCCAGGGGTAAAAGGCTATTGCATTGATATCTTTGAAGCAGCATTAAACTTGTTGCCTTATCCTGTTCCACGGCAATATATATTATATGGATCTGGTGACAGAAATCCTGACTACAATGAGCTTGTGAATCAGGTTGCACAAAATAGATTTGATGCAGCTGTTGGAGATATTACAATTGTCACAAATAGGACAAGGCTTGTGGATTTTACTCAACCTTTTATTGAATCGGGGCTGGATGTAGTTGTTCCTGTTAGGGAGGGAAAGTCCAGCCCTTGGGCTTTCCTCAAGCCATTTACTGCTCAAATGTGGTGTGTCACTGCTGCTGCCTTTCTTTTCGTGGGAGCTGTTGTATGGATTCTTGAACACCGGCACAATCATGAGTTCCGTGGTCGACCAAGCAAACAACTTGTAACGATTTGTTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAACACAGTGAGTGCTCTGGGACGATTGGTGCTAATTGTATGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATCCTCACAGTGCAGCAGCTGTCATCACAGATCGAAGGAATTGACAGTTTGATCTCAAGTACACAACCAATTGGAGTTCAAGATGGGTCATTTGCACGAGAGTATCTGATAGATGAGCTGAAAATAGCTGAATCAAGGATCGTTACATTGAAAAACCAGCAGGATTATATCGATGCCCTTGAGCGTGGACCAAGAGGTGGAGGGGTAGTTGCCATTGTTGATGAGCTTCCTTACATTGAGCTCTTCACGTCCAACACCAACTGCAAGTTCAGAACTGTTGGGCAGGAGTTTACTAAAAGTGGATGGGGATTTGCATTCCAGAGAGACTCTCCCCTTGCAGTTGACTTATCAACAGCCATTCTTCAACTGTCTGAGAATGGAGACCTGCAAAAGATCCATGACAAATGGCTTTTAAGGAATGATTGTAGTGACCAAAGCAAGGATTCTGATGCAAACCAACTGGCTTTGAGTAGCTTCTGGGGACTCTTTCTGATATGTGGCATTGCATGTCTGCTTGCTTTGATTGCGTTCTTTGTGAGGGTGTTTTGTCAATTTACGAAATTCAGCAGAGAGCCTGAGGACGGTGATCCGGAATTGCCGCCTATCAGGCATAAACGCACAACCCGAACTTCTAGCTTCAAGGACTTGATCCATTTTGCAGATAAAAGAGAAGCAGAAATCAAAGAGAGACTTAGGAAGAATAGAAACAAACGGCAACGCAGCCAGAGCACAGATTGGCAGTCTAGTTCACCCTAA 4605 0.4202 MQNQSAASIGLNTYGFYAYDSIWTVARSIDKFIEVHKNITFSVNNSTKLLHTEAANIQLDKLKVFAGGPDLINILLQSNFTGVSGQVQFNSNRNIISGGYDVININQMEIIRVGYWSHTSGFSVVPPETLNRKEHGRFSQDQKLNMTWPGGKTGRPRGWVIADSAGPLRIGVPRRAKLLLKNFLNDLYILMVFDAVVGDIAIVANRTRIVDFSQPFASAGLVIVAPIKNAKSSVWVFFKPFTADMWCVTAASFMMIGVVIWVLEHRVNDDFRGPPKRQLVTMFIFSLSTLFKTNRKETFGFKVYLLDYSGEIMTLVGSALHFNLTNFHFVMNSEENTVSSLGRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYNYLTDSLYVPRSRLVSLGSSGEYARALQKGPTGGGVAAIIDELPYVELFLSTQTDFGIIGQPFTRSSWGFAFQRESRLALDMSTAILKLGENGDLQKIREKWFCKMGCPEERKGNYEPNRLHLISFWGLYLSCGVVTLAAVLVFLLLTIRQYVRYKRRQRDISSSSMETSESHCSQNFDKGGLRNWLYDRAFPKLEALLITRHGSLAMARTLFLLVFCLWIPTEVMGRTGNTQINNTVPSRPSVVRIGALFTFDSVIGRSAKPAILAAIDDVNSNTSILSGIKLEVILHDTSCSGFLGIMGALQLMENDVVAAVGPQSSGIAHVISHVVNELHVPLISFGATDPVLSALQYPYFIRTTQNDYFQMYAIADLIEHYGWREVVAIFVDDDNGRNGISILGDALANKRAKISYKAAFPPGAAKSNISDLLNRVNLKESRVYVLHVNPDSGLAIFSIAKKLGMMSSGYVWIATDWLPTVLDSSEPSKPDTMNLLQGVVAFRHHTPDTDLKKTLITKLKNQKDNKTAGFNSYALYAYDSIWLAAHALHVFLSEGGNISFSNDPRLHDTSGSMLHLASLRTFDGGPLFHQTILRMNFTGVSGQIQFDMEKNLIHPAYDILNIGGSGPRIIGYWSNYSGLSDVAPETLYTKPRNSSTGNKRLHSVIWPGEITTTPRGWVFPNNGKPLRIAVPNRISYLEFVGKTKNPPGVKGYCIDIFEAALNLLPYPVPRQYILYGSGDRNPDYNELVNQVAQNRFDAAVGDITIVTNRTRLVDFTQPFIESGLDVVVPVREGKSSPWAFLKPFTAQMWCVTAAAFLFVGAVVWILEHRHNHEFRGRPSKQLVTICWFSFSTMFFSHRENTVSALGRLVLIVWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFAREYLIDELKIAESRIVTLKNQQDYIDALERGPRGGGVVAIVDELPYIELFTSNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLLRNDCSDQSKDSDANQLALSSFWGLFLICGIACLLALIAFFVRVFCQFTKFSREPEDGDPELPPIRHKRTTRTSSFKDLIHFADKREAEIKERLRKNRNKRQRSQSTDWQSSSP 1534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1448 1534 Gene3D - 1 95 - -
Glsi14g1448 1534 CDD PBP1_GABAb_receptor_plant 645 1036 IPR044440 -
Glsi14g1448 1534 Gene3D - 1315 1423 - -
Glsi14g1448 1534 FunFam Glutamate receptor 399 506 - -
Glsi14g1448 1534 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 717 745 - -
Glsi14g1448 1534 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 930 942 - -
Glsi14g1448 1534 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 657 673 - -
Glsi14g1448 1534 FunFam Glutamate receptor 1074 1190 - -
Glsi14g1448 1534 MobiDBLite consensus disorder prediction 1474 1500 - -
Glsi14g1448 1534 Gene3D - 233 401 - -
Glsi14g1448 1534 Gene3D - 1074 1190 - -
Glsi14g1448 1534 SUPERFAMILY Periplasmic binding protein-like II 193 502 - -
Glsi14g1448 1534 Pfam Bacterial extracellular solute-binding proteins, family 3 1134 1420 IPR001638 -
Glsi14g1448 1534 Gene3D - 1191 1314 - -
Glsi14g1448 1534 Pfam Ligand-gated ion channel 503 534 IPR001320 GO:0015276|GO:0016020
Glsi14g1448 1534 FunFam Glutamate receptor 759 926 - -
Glsi14g1448 1534 FunFam Glutamate receptor 1190 1320 - -
Glsi14g1448 1534 Gene3D - 663 1007 - -
Glsi14g1448 1534 SUPERFAMILY Periplasmic binding protein-like I 639 1071 IPR028082 -
Glsi14g1448 1534 Gene3D - 759 1032 - -
Glsi14g1448 1534 Coils Coil 1316 1336 - -
Glsi14g1448 1534 Gene3D - 450 509 - -
Glsi14g1448 1534 SMART GluR_14 298 504 IPR001320 GO:0015276|GO:0016020
Glsi14g1448 1534 SMART GluR_14 1080 1422 IPR001320 GO:0015276|GO:0016020
Glsi14g1448 1534 Gene3D - 134 232 - -
Glsi14g1448 1534 Pfam Receptor family ligand binding region 661 1016 IPR001828 -
Glsi14g1448 1534 Pfam Receptor family ligand binding region 13 106 IPR001828 -
Glsi14g1448 1534 SUPERFAMILY Periplasmic binding protein-like II 1056 1422 - -
Glsi14g1448 1534 FunFam Glutamate receptor 1316 1424 - -
Glsi14g1448 1534 CDD GluR_Plant 1077 1420 - -
Glsi14g1448 1534 MobiDBLite consensus disorder prediction 1512 1534 - -
Glsi14g1448 1534 Pfam Bacterial extracellular solute-binding proteins, family 3 193 502 IPR001638 -
Glsi14g1448 1534 Pfam Ligand-gated ion channel 1421 1453 IPR001320 GO:0015276|GO:0016020
Glsi14g1448 1534 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 645 1506 IPR015683 -
Glsi14g1448 1534 SUPERFAMILY Periplasmic binding protein-like I 9 159 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1448 Glsi-ChrGlsi14 15020036 15041598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1448 10 469 Ion Channels AT1G05200 44.379 5.95e-124 406