Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1445 ATGGCTAGAATGAGATCAAGAACTGTAGCCGGTATGATGATTCCGGCAAGAAATATGCCCTCCATGATTGGAAGGAACGGCAACGTTGGTGGGTTTGGATCGTCCTCAGGGCTCACTCTTGGCCAGCCAAACATGATGGAAGGCCAACTCCACCCACTGGACATGGCTCAGAACACCTCCGAGAGTGATGTCCCCCGCATCCGGGAAGATGACTTCGACAGTGCCACTAAGTCCGGGAGTGAAAACCATGAAGGTGCCTCCGGCGACGACCAAGACCCACGCCCCAAAAAGAAGCGCTACCACCGCCATACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGCCCACACCCAGATGACAAGCAAAGAAAGGAGCTAAGCAGAGAATTAGGGCTAGAACCATTGCAGGTGAAGTTTTGGTTCCAGAACAAGCGCACACAGATGAAGACCCAACATGAGCGCCAAGAGAACACACAACTTAGAACCGAAAATGATAAGCTTCGAGCTGATAACATGCGATATAGGGAAGCTCTTAGCAATGCCTCATGTCCGAATTGTGGTGGACCAACCGCTATAGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATCGAAAATGCCCGCCTAAGAGAAGAGATTGATCGGATTTCTGCAATTGCTGCCAAGTACGTAGGCAAGCCTGTGGTGAACTATCCACTGCTTTCCCCTTCGGTTGCTCCCCGTCCACTGGAACTTGGGGTTGGTGGTTTTGGTGGGCAGGCAGGCATGGGTGGGGATATGTATGGAGCTGGGGATCTTCTTAGGTCAATCAGTGGGCCCACCGAAGCTGATAAACCTATGATAATAGAGCTTGCTGTGGCAGCCATGGAGGAACTCGTGAGGATGGCACAAATGGGAGAGCCCTTATGGTTGAGTACCCTTGATGGCACTACCACTGTTCTAAACGAGGATGAATACATTAGATCGTTTCCCAGAGGAATTGGTCCAAAACCTACTGGCTTCAAGTGTGAAGCTTCAAGAGAAACTTGTGTTGTTATCATGAACCATATTAATCTTGTGGAGATTCTCATGGACGTGAACCAATGGGCGACGGTGTTTTCTGGTATAGTGTCTAGAGCAATGACTGTGGAAGTGTTATCAACAGGAGTGGCTGGGAACTACAATGGTGCCTTGCAAGTGATGACAGCAGAGCTACAAGTGCCTTCGCCTCTTGTGCCAACTCGAGAGAGTTATTTTGTAAGGTATTGTAAACAGCACGTGGATGGGACATGGGCAGTAGTGGATGTGTCCTTGGATAATTTGCGCCCTAGCCCTTCAGCGAGATGCAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAATTGCCCAATGGCTACTCAAAGGTCACATGGGTTGAGCATGTAGAAGTGGACGATAGAGGAGTTCATGATCTATACAAGCAGCTTGTTAGTTCTGGACATGCATTTGGCGCAAAACGTTGGGTGGCTACTTTGGATCGACAATGTGAAAGACTCGCTAGTGCCATGGCAACAAACATTCCTAGTGGTGATGTTGGTGTGATAACAAACCAAGAAGGGAGGAAGAGTATGCTGAAATTGGCAGAGAGAATGGTAATGAGCTTTTGTGCCGGAGTGAGTGCTTCTACTGCTCACACATGGACTACACTCTCTGGAACTGGGGCTGATGATGTGAGGGTCATGACCCGTAAGAGTGTAGATGACCCAGGAAGACCTCCTGGTATCGTTCTTAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCACCAAACAGAGTTTTTGATTTCCTCCGTGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGAGTAGTGCAAGAAATGGCACATATAGCTAATGGGCAAGATACAGGAAATTGTGTATCTCTACTTCGGGTGAATAGTGCGAATTCAAGCCAAAGCAACATGTTGATATTACAAGAGAGCTGCACAGACACGACGGGGTCTTTTGTAATTTATGCTCCTGTTGATATTGTTGCGATGAATGTAGTTCTAAATGGTGGGGACCCGGACTATGTAGCCCTTCTTCCTTCTGGATTTGCTATCCTTCCAGATGGAACCACAGCTCATGCTGAAACTGGTCATGGTGGATCTCTCTTGACTGTTGCATTTCAAATCTTGGTTGATTCAGTTCCAACTGCGAAGCTTTCTCTTGGATCTGTTGCCACTGTTAATAATCTTATTGCCTGCACTGTTGAGAGAATTAAGGCTTCTTTATCGTGTGAAGCTGCCTGA 2286 0.4751 MARMRSRTVAGMMIPARNMPSMIGRNGNVGGFGSSSGLTLGQPNMMEGQLHPLDMAQNTSESDVPRIREDDFDSATKSGSENHEGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENTQLRTENDKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPVVNYPLLSPSVAPRPLELGVGGFGGQAGMGGDMYGAGDLLRSISGPTEADKPMIIELAVAAMEELVRMAQMGEPLWLSTLDGTTTVLNEDEYIRSFPRGIGPKPTGFKCEASRETCVVIMNHINLVEILMDVNQWATVFSGIVSRAMTVEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHVDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQELPNGYSKVTWVEHVEVDDRGVHDLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPSGDVGVITNQEGRKSMLKLAERMVMSFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHAETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1445 761 FunFam Homeobox-leucine zipper protein HDG1 82 170 - -
Glsi14g1445 761 MobiDBLite consensus disorder prediction 25 46 - -
Glsi14g1445 761 SUPERFAMILY Homeodomain-like 83 154 IPR009057 -
Glsi14g1445 761 MobiDBLite consensus disorder prediction 71 96 - -
Glsi14g1445 761 Pfam START domain 287 506 IPR002913 GO:0008289
Glsi14g1445 761 MobiDBLite consensus disorder prediction 28 43 - -
Glsi14g1445 761 Gene3D - 82 171 - -
Glsi14g1445 761 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 94 756 IPR042160 -
Glsi14g1445 761 MobiDBLite consensus disorder prediction 71 105 - -
Glsi14g1445 761 SUPERFAMILY Bet v1-like 277 508 - -
Glsi14g1445 761 ProSiteProfiles 'Homeobox' domain profile. 94 154 IPR001356 GO:0003677
Glsi14g1445 761 Gene3D - 335 502 IPR023393 -
Glsi14g1445 761 SMART HOX_1 95 158 IPR001356 GO:0003677
Glsi14g1445 761 SUPERFAMILY Bet v1-like 525 753 - -
Glsi14g1445 761 ProSiteProfiles START domain profile. 277 509 IPR002913 GO:0008289
Glsi14g1445 761 CDD START_ArGLABRA2_like 281 505 - -
Glsi14g1445 761 Pfam Homeodomain 97 152 IPR001356 GO:0003677
Glsi14g1445 761 SMART START_1 286 506 IPR002913 GO:0008289
Glsi14g1445 761 ProSitePatterns 'Homeobox' domain signature. 129 152 IPR017970 GO:0000981|GO:0006355
Glsi14g1445 761 CDD homeodomain 97 155 IPR001356 GO:0003677
Glsi14g1445 761 Coils Coil 153 180 - -
Glsi14g1445 761 FunFam Homeobox-leucine zipper protein GLABRA 2 286 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1445 Glsi-ChrGlsi14 15007411 15011586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1445 42 761 Homeobox Transcription Factor Family AT1G05230 78.581 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Glsi14g1445 START 7.9e-59 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1445 14 15007411 15011586 Glsi04g0955 04 7648012 7654286 CCT
Glsi14g1445 14 15007411 15011586 Glsi14g1445 14 15007411 15011586 ECH