Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1438 ATGGGAAGCCAGAGTCACCTGAGGGTTTTGTTTCTTTGCCTTATAGCAATAATTGGATCAACTCAGGCTCAATTGCAGCAAGGATTCTATGCTAGGAGCTGCCCAAGAGCTGAGACGATCATTAAAAATTTTGTGAATGAGCACATCCCCAATGCCCCGTCATTGGCAGCTGCCCTCATAAGAATGCACTTCCATGACTGCTTTGTCAGGGGCTGTGATGCATCAGTGCTTCTGAACTCAACAACCAACCAAGCTGAGAAGGATGCCCCTCCAAATCTTACAGTCAGAGGCTTCGACTTCATTGACAGAATAAAGAGCCTCGTTGAAGCCGAATGCCCTGGTGTAGTTTCTTGTGCTGATATTATAGTTTTGGCTGCCAGAGACTCCATTGTTGCCACAGGTGGTCCCTCTTGGAATGTTCCGACAGGTCGAAGAGACGGAGTCGTCTCTAACTTGCTGGAAGCCAGAAACAACATTCCTGCTCCAACTTCCAACTTCAGCACCCTCCAAACCCTCTTTGCCAATCAGGGACTTGATCTAAATGACTTAGTCCTCCTCTCTGGTGCTCACACAGTTGGTGTCTCCCATTGCACTGCATTTTCGAACCGTCTCTATAACTTTACTGGTAGGGGCGATCAAGACCCAGCTCTAGACAGTGAATATGCAACAAATCTGAAGACCTTCAAGTGCAGGACTATCAATGACAATACCACACTTGTTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATGGTCATGTCGTTAAGAGAAGGGGCCTGTTCCAATCGGATGCTGCTCTGTTGAATAACTCTGTTACAAGTTCTACCATCAACCAGCTGCTTCAGGGGTCACTTCAAAACTTCTTCGCTGAATTTGCCACGTCCATGGAGAAAATGGGCCGAATCAACGTCAAGACTGGGACACAAGGAGAGATCAGGAAGCAATGTGCACTTGTAAATAGCTAA 978 0.4683 MGSQSHLRVLFLCLIAIIGSTQAQLQQGFYARSCPRAETIIKNFVNEHIPNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKDAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIVLAARDSIVATGGPSWNVPTGRRDGVVSNLLEARNNIPAPTSNFSTLQTLFANQGLDLNDLVLLSGAHTVGVSHCTAFSNRLYNFTGRGDQDPALDSEYATNLKTFKCRTINDNTTLVEMDPGSRKTFDLSYYGHVVKRRGLFQSDAALLNNSVTSSTINQLLQGSLQNFFAEFATSMEKMGRINVKTGTQGEIRKQCALVNS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1438 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Glsi14g1438 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PANTHER PEROXIDASE 25-RELATED 15 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Glsi14g1438 325 FunFam Peroxidase 28 169 - -
Glsi14g1438 325 FunFam Peroxidase 160 303 - -
Glsi14g1438 325 Gene3D - 29 324 - -
Glsi14g1438 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Glsi14g1438 325 Gene3D Peroxidase, domain 2 160 303 - -
Glsi14g1438 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi14g1438 325 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1438 Glsi-ChrGlsi14 14963337 14964601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1438 7 325 Peroxidase AT1G05260 71.473 3.15e-175 486