Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1435 ATGGAAGGCCATGCCTTGCAGCTTATTTTTATTGATTTGATCAAGTTTATCACTTTAATTGTATGTGAATGAAGCGCAAAGTGGATTCCTTTTCCTGATATAAGCGTAGCTGAAGCTAATCTCAGAGAGCAAGAAAAGAAAAGGGCAGCAGAGTTTTTTGCCATATCAGCTGCATCGCCAGAGAAGCAGTGCATCAGAGCCCCATCACTCAACTGCTTTGCCTCATGTCAGGCGATGGGCCTCTATGCTGCCTCATTTCAGACACTTCTGACAACACTGTTCAGCATGAATTCCTATTTGTATAATTGTCTTAAAGCATGCTCCTCTTTATTCTTTTATAGTCTTCCATGCTTGGATTCACGCTCTATTGGGGCAGTTGCGGGTCTTGCTGTTGCAGTTTTCTTCTTGTGGAGGCTCTTGAGATTCCCTAATGGATCTCAACGTAGGCAACGGAAGCGGCAAACTGCTACACCTAGTACTTCTGGAGTAAATACTCAAATTCTTCTGGATTTTGTTCACCCTCAGGTAACATGTTGTCTTGTAGGAGTGATACTTGAGGAAAGTAGCCCAGAAGAGCTTCAGGTAGTGAGATTGCATTTATTGTATTTTTGCCAAGACATCAATGTGGAGAAAGATATCAATGTGGTTCGTGCTGCTTTTTGCTGGAAACAAGCAACTGTGAGGTCCTCTGTGCTGGAAGTGTTGTTGGAGATAACAAAATTTTGCGATTTATATCTCATGGAACGAGTTCTAGATGATGAAAGTGAGATATTCTATAGCTTCTTGAGAAAAGAGTTCTTGTACCATTGGAAGATGCCGAGGTTTTCACTTAAGGTGGTCTGGTCAAGGACAAGGACATGTGTTGATGAACAACATAAGAATATCTTTCTAACTACATTTACCTGCATGCAGGTCCTCTTCTGTAGCACAGAGAATGGACGGTCATCATTTGTTCGGCAGTTGGAACCAGATTGGCATATCGACACAAATCCTCAAATTGTCTCCCTTTACGGAACATGTGTATTTTGTTTTCCTCTATTGTATTTGGCCGTCTTTCTGGCAGTAGCATTTCTAAGCATCAGATCAATGGTCTGTTACGCCCTAGCCAACGTTCATGTCCAGTCTGAAATGGACCCTTGGAAAAAACCTCATCGGGCGACCGGGAAAGGGCCGAAACACAATTGTCTCAGGGTGCTGGATCTACCTGATTTCTGGGCGCCGTCACATTTGCCTCATGCATTTAGTGAACTCTGTTCTTCTCAGTTCTCACACTTCGCTGTAACAATGGAGGCCGTTTGCTCGATTGACTCGCGGTGTGCCAATGAAATGTCTGCTCTTCTCAGTCCTCCATCAACTCTTCAAGTTCAGGAATATTATGACAAGCTTTTATCTACCAGGAAGTGCAGTACTATCATAGTCAAACAGGATGGAAACTTTGGAAAGGGTGTGTATTCTGCCATGGACTTCAACGAAGGGGAGCTTGTTCTGAAAGACCAAATGCTTGTTGGGGCTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTCCTGCTTTCGTTTTATTGGTTCTGTAGAACTTCAAATTGGAAGGAGACTTTACTTGCAAGAATTAGGAGCTTCTGAGAGTCATGGTTGTGATATGAAAGGTTTTTCAACCACTTCAAAACGCTGCTATGAAATAGATTCATCTGATGGAGAAGACAATTTATATATGAAAAATGAGGAGAGAACTGGAGAATGTACCAGTAGTTCTGAAGCTAAAATTCGTCTCCCTGAAGGTGTTGTTGAATCATTAATGAATGGCCATATGATGCTGCCTTACTCTAAGGAGTTCTCCTTGCCACAAGCTGTTCCATGCCCTGGTGGATGTGGCGAAGCTTACTACTGCAGCACATCTTGTGCAGAGGACGATTGGAAATCCTCTCATTCTTTACTTTGTACTGGTGAGAGGTCTGATACAGCACGTAAGGAGGCACTTCTAAAATTCATCAAGCATGCTAATGAAACCAATGATATATTCCTCCTTGCTGCTAAGGCTATTTCTTCCACAATACTAAGGTACCACAAGTTAAAAGCAAGCCGTCTTGCAGAGCAAGGGAAATATGGTAAAGCATGTGTTTCAAATCACTGTGATCTCTCTGTTCTTTTGGAGGCTTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGATTGTATTGCATTGCCAGATGATGTTAATTCTTTTGACGAAGCTGCATTCAGGATGCAAATAAGAGATCTGGCATTTGAGTCACTCCAACTTCTTAAGAGAGCTATGTTTGACAAGGAGTGTGAGCCATTATTCTCCCTTGAAATATATGGACATATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATCGATGATCTAACATATCCTGAAAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTGGATGCTCTTGGTGAAGACTATTCCATTTGTTGCCAGGGAACTGCATTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTTATCCTAATGCCAAGGCTTACAAAAGAGAGGAGGATCGAGATGGCCAAGCAACGATAATTGCACTGAGATCCATTTGTAAGGGAGAAGAGATAACCATCTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAGGAATCCCTTGCAGATTATGGTTTCAGATGCAGGTGCCCAAAGTGCATTGAAGAGGAGCCATAA 2769 0.4218 MEGHALQLIFIDLIKFITLIVCEXSAKWIPFPDISVAEANLREQEKKRAAEFFAISAASPEKQCIRAPSLNCFASCQAMGLYAASFQTLLTTLFSMNSYLYNCLKACSSLFFYSLPCLDSRSIGAVAGLAVAVFFLWRLLRFPNGSQRRQRKRQTATPSTSGVNTQILLDFVHPQVTCCLVGVILEESSPEELQVVRLHLLYFCQDINVEKDINVVRAAFCWKQATVRSSVLEVLLEITKFCDLYLMERVLDDESEIFYSFLRKEFLYHWKMPRFSLKVVWSRTRTCVDEQHKNIFLTTFTCMQVLFCSTENGRSSFVRQLEPDWHIDTNPQIVSLYGTCVFCFPLLYLAVFLAVAFLSIRSMVCYALANVHVQSEMDPWKKPHRATGKGPKHNCLRVLDLPDFWAPSHLPHAFSELCSSQFSHFAVTMEAVCSIDSRCANEMSALLSPPSTLQVQEYYDKLLSTRKCSTIIVKQDGNFGKGVYSAMDFNEGELVLKDQMLVGAQHSSNKIDCFVCSSCFRFIGSVELQIGRRLYLQELGASESHGCDMKGFSTTSKRCYEIDSSDGEDNLYMKNEERTGECTSSSEAKIRLPEGVVESLMNGHMMLPYSKEFSLPQAVPCPGGCGEAYYCSTSCAEDDWKSSHSLLCTGERSDTARKEALLKFIKHANETNDIFLLAAKAISSTILRYHKLKASRLAEQGKYGKACVSNHCDLSVLLEAWRPISMGHKRRWWDCIALPDDVNSFDEAAFRMQIRDLAFESLQLLKRAMFDKECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLTYPEKEEAEKITQPILDALGEDYSICCQGTAFFPLQSCMNHSCYPNAKAYKREEDRDGQATIIALRSICKGEEITISYVDEDLPFEERQESLADYGFRCRCPKCIEEEP 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1435 922 CDD SET_SMYD 831 917 - -
Glsi14g1435 922 SUPERFAMILY HIT/MYND zinc finger-like 620 649 - -
Glsi14g1435 922 Gene3D SET domain 814 921 IPR046341 -
Glsi14g1435 922 Pfam SET domain 817 891 IPR001214 GO:0005515
Glsi14g1435 922 SUPERFAMILY SET domain 465 917 IPR046341 -
Glsi14g1435 922 Pfam MYND finger 619 648 IPR002893 -
Glsi14g1435 922 ProSiteProfiles SET domain profile. 469 892 IPR001214 GO:0005515
Glsi14g1435 922 Gene3D - 574 650 - -
Glsi14g1435 922 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 442 921 IPR044237 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1435 Glsi-ChrGlsi14 14922684 14943810 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi14g1435 SET 9.3e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1435 14 14922684 14943810 Glsi14g1435 14 14922684 14943810 ECH