Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1433 ATGGAACCTCTATGTGAGTTTTGTGGGGTTGTAAGAGCAGTGGTGTACTGCAAGTCAGATGCCGCTCGTCTCTGCTTGAATTGCGATGGTGCTGTACACTCTGCCAATTCTTTGTCACGCAGGCATCCTCGTTCACTCGTATGTGATAAGTGCTATTCCCAACCCGCAATTGTCCGCTGCATGGATGATAAATTGTCTCTGTGTCAAGGTTGTGGCTCTAATGGAAATGGCTGTTCGGTATTGGGACATAGGCGTCTGGCTTTGAACGGTTATACAGGTTGTCCTTCCTTCACTGAGATGTCTAGGATATGGCCCTTTGCTCTTGATCCTGCTTCTTCAGGTGGTTTAGATAATGGTTGGGGATCTTTCAATACATTACCTAAAAATGACAGCTGCACTAGCAAGTGTTTGGAGCAGCCAGATAATGATGGCTCCTTTACTGGCAAATTGAATGAGATAGAATCATGTGCCAATTATGAACCCTGGATGGATCAATCTTCTATCATTCAACCGAATCCAAATTTCATGCCATACTGCAGAGATCAAGCAGTTTTCTTTCCTCAAGACTCGAACCTGCCAAAGGGATGTCCCAATTCCAAGGATCTTGGAATTCATGATGGTGATGGTCTCTGTGACGGTCTCAACATGGACGGTGTTCAATTAAACTTTGACAGTGGCAATGAAATATTTGACTGCTCTCAAGGTGCTACCAATTACCAGCTTGAGGATGGAGGATTGGATTGTCTATTGATGGAAAAAAGCATATCAGCCACAGAATCTAATGGCCTTATTCAGAATGCCATGGAGGCATCAACGTCAGTCCAACAAGATTGTGTGCCTTTTCAATCATCCAGGGCTGGTGGGTCAGGTAGTGTGATGCAGGCGATCAACATTAATGCAAGCCGTGTACTTGTGAATCCTACCTGCAACAGAAACATCAATCTGGGATTTCCTCAGGGTCAAGTGCATTCAAGCATATCACTTTCATTACCTAACATAACTGGTGAAAGTAGCGCTGCTAACTATCAAGATTGTGGGTTATCATCAGCATTATTGACAGTTGATACACCATGGGAATCAAATATGGAGGCTACATGCCCACAAGCAAGGGACAAAGCTAAGATGAGATACCATGAGAAAAAGAAAACTCGAACGTTTGGTAAACAAATAAGATATGCATCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCAGGCGAAGCCTATGATTATGATCCCCTAGTGTACGCATGCTTTCATGTTGTCAGAGAGGTTGCTCCATGTGAAGTTGTGATTTATCCTGAATTTTACCAGGTGAGATTGTCTGAGTTGCTGGACCTTTGTGTCACATGTAAACATCATCTAATAGAGTATCAAAGCGCAAGCAACTACAACCAACCACCCATAATCTGCTTTCAGTTTGTTTGTCCCAGCTGTTGGGTTGCTGAAACCAATTTCAATGGGTTGAATTGTGCACACCTAGAGCAACCACTTGCATCTTTGACAGCCAATGCACTGCCTCATTCATCAATATGTGTAGTATTGCTTTAA 1572 0.4319 MEPLCEFCGVVRAVVYCKSDAARLCLNCDGAVHSANSLSRRHPRSLVCDKCYSQPAIVRCMDDKLSLCQGCGSNGNGCSVLGHRRLALNGYTGCPSFTEMSRIWPFALDPASSGGLDNGWGSFNTLPKNDSCTSKCLEQPDNDGSFTGKLNEIESCANYEPWMDQSSIIQPNPNFMPYCRDQAVFFPQDSNLPKGCPNSKDLGIHDGDGLCDGLNMDGVQLNFDSGNEIFDCSQGATNYQLEDGGLDCLLMEKSISATESNGLIQNAMEASTSVQQDCVPFQSSRAGGSGSVMQAININASRVLVNPTCNRNINLGFPQGQVHSSISLSLPNITGESSAANYQDCGLSSALLTVDTPWESNMEATCPQARDKAKMRYHEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVYACFHVVREVAPCEVVIYPEFYQVRLSELLDLCVTCKHHLIEYQSASNYNQPPIICFQFVCPSCWVAETNFNGLNCAHLEQPLASLTANALPHSSICVVLL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1433 523 Pfam CCT motif 370 412 IPR010402 GO:0005515
Glsi14g1433 523 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 415 - -
Glsi14g1433 523 ProSiteProfiles CCT domain profile. 370 412 IPR010402 GO:0005515
Glsi14g1433 523 CDD Bbox1_BBX-like 4 47 - -
Glsi14g1433 523 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Glsi14g1433 523 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1433 Glsi-ChrGlsi14 14914320 14917662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1433 1 420 C2C2-CO-like Transcription Factor Family AT3G21880 43.735 7.76e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Glsi14g1433 CCT 1.2e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1433 14 14914320 14917662 Glsi14g1433 14 14914320 14917662 ECH