Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1432 ATGTGCAAAGGTGCAGAAGAGGAAAAGTGTGCTGGTTTTCTCAGGGGCTTCCAACCTAAAGAGTTTGCTTCACTTGGCGCAACCAGAGGTTCAATATATTGTGAGCTGTGCGGGTTACGGGCTTCATTGTATTGCCGAGCTGATGATGCGTATTTATGTAGAAAATGTGACAAATGGGTTCATAAAGCCAATTTCTTGGCCCTCAGGCACGTTAGATGCTTTCTCTGCAAGAGATGCCAAAACCTTACACGACGATGTCTCATTGGAGCCTCAGTAGATGTCGTTCTTCCTGCCGTAACTTGGGCTGGAGTAAGCCTGCCTAACAACAGCAACGACAAATAG 342 0.4649 MCKGAEEEKCAGFLRGFQPKEFASLGATRGSIYCELCGLRASLYCRADDAYLCRKCDKWVHKANFLALRHVRCFLCKRCQNLTRRCLIGASVDVVLPAVTWAGVSLPNNSNDK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1432 113 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 33 83 - -
Glsi14g1432 113 SMART bboxneu5 29 75 IPR000315 GO:0008270
Glsi14g1432 113 ProSiteProfiles Zinc finger B-box type profile. 29 70 IPR000315 GO:0008270
Glsi14g1432 113 Pfam B-box zinc finger 32 70 IPR000315 GO:0008270
Glsi14g1432 113 CDD Bbox1_BBX-like 34 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1432 Glsi-ChrGlsi14 14913569 14913910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1432 32 113 C2C2-CO-like Transcription Factor Family AT3G21890 56.627 4.23e-27 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi14g1432 zf-B_box 2.4e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1432 14 14913569 14913910 Glsi14g1432 14 14913569 14913910 ECH