Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1417 ATGTTTCCCATGAAATCGATCCTTCTCACTCTCTTGGTGTTCTGCCTTTCTCTCCATGCAGCCAATAGTGTCAGCCCATTATTCCATTTCTGTTTTAGCCGCGAAAACTACACTACTAATAGCCCTTACGCCACCAACTTGAACCAGTTGTTTAGCCTCTTATATACCAGAGTGCCTCCAACTGGTTTTGGTCTTGGCTCCGTTGGCCAAGGCACCGACCAAGTGAACGGTCTAGCCTTGTGTCGCGGCGATGTCTCCACCACAAACTGCGAGTCTTGTGTCATCGAGGCAAGCAAAAAGCTTGAAGAACGCTGCCCAAAAAAGAAGGGGGCAATAGTTTGGTACGATTACTGCCTTTTGAAGTACTCAAATGAATACTTCTTTGGAGAAATAGACAACAAGAACAAGTTCTATATGCTTAACATATACGACGTAGATGATCCTACCACATTTAACGGCAAAGTGAATGAGTTATTGGGCAGCTTGTCTTACAAAGCGTCTGACACTCCTAAACTATATGCCACCGGGGAACTAAAACTCGACGAATCAAAAACGCTGTATGGTTTGGCTCAGTGTACGAGAGACCTCTTAGGCCCTGGTTGTAAGAAGTGTCTCGATGAGGCTATTAGCGAACTTCCAAATTGTTGTGATGGAAAGCAAGGTGGAAGGGTTGTGGGTGGGAGCTGCTATGTTAGATATGAATTGTACCCTATTATTTTGATTGGTCAAACTGGAGAAGATTCTCCTGACATTCAACATTTGAATTTAGTAAACATGTTTGTCCTTGAACCCTTGATCAGGTTACTTTTCGCAGCAATACTAATCCAAATCGCCATGGCAGCTAATCACATTGTCGGAGGACCAAATGGTGGGTGGGATACAAACTCAAACCTTCAAGCGTGGACATCATCCCAAAAATTTTCAGTGGGAGACAATCTGATTTTTCAATACCCGCCGAACCATGATGTGGTTGAAGTTACAAAGGCAGACTATGACTCCTGCCAGCCAACAAACCCAGTTCAGTCTTACAATGATGGCGCCACAACCATCCCTCTCACTTCGCCAGGCAAAAGATACTTCATCTGTGGAACTTTAGGACATTGCAGCCAAGGTATGAAGGTCGAAATAGACACTCTTGCCAGTGTAACTCCTTCCACCTCGCCGACAGCATCTCCTTCACCCGCAATCCCCGTCGATCTCTCCCCAGTTCCTGTATCTACTGAATCACCTGCTGAATCTCCACAATATATTCCGGCAGCACCAAGTCCACTGTTGGAAACACATCTGGATGGTCCTACATTGTCCCCAGTCATTCCTTCCACTGAATTTCCAGCTGCTGCCTCACCTCTAGCCGAACATTCACTAGACCCATCAATTGCATCAGCAAAGAAAGGAAACCTACAGGCCTTCATTGCGATTGTGTTTAGCTTTCTATTGATGCTTCTAGCCTAA 1452 0.4532 MFPMKSILLTLLVFCLSLHAANSVSPLFHFCFSRENYTTNSPYATNLNQLFSLLYTRVPPTGFGLGSVGQGTDQVNGLALCRGDVSTTNCESCVIEASKKLEERCPKKKGAIVWYDYCLLKYSNEYFFGEIDNKNKFYMLNIYDVDDPTTFNGKVNELLGSLSYKASDTPKLYATGELKLDESKTLYGLAQCTRDLLGPGCKKCLDEAISELPNCCDGKQGGRVVGGSCYVRYELYPIILIGQTGEDSPDIQHLNLVNMFVLEPLIRLLFAAILIQIAMAANHIVGGPNGGWDTNSNLQAWTSSQKFSVGDNLIFQYPPNHDVVEVTKADYDSCQPTNPVQSYNDGATTIPLTSPGKRYFICGTLGHCSQGMKVEIDTLASVTPSTSPTASPSPAIPVDLSPVPVSTESPAESPQYIPAAPSPLLETHLDGPTLSPVIPSTEFPAAASPLAEHSLDPSIASAKKGNLQAFIAIVFSFLLMLLA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1417 483 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Glsi14g1417 483 MobiDBLite consensus disorder prediction 382 422 - -
Glsi14g1417 483 Gene3D - 24 127 IPR038408 -
Glsi14g1417 483 Gene3D - 134 237 IPR038408 -
Glsi14g1417 483 CDD Phytocyanin 281 377 - -
Glsi14g1417 483 ProSiteProfiles Phytocyanin domain profile. 281 380 IPR003245 GO:0009055
Glsi14g1417 483 Gene3D - 279 383 IPR008972 -
Glsi14g1417 483 FunFam Cysteine-rich receptor-like protein kinase 25 135 238 - -
Glsi14g1417 483 Pfam Salt stress response/antifungal 147 236 IPR002902 -
Glsi14g1417 483 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Glsi14g1417 483 FunFam Cysteine-rich receptor-like protein kinase 28 28 126 - -
Glsi14g1417 483 Pfam Plastocyanin-like domain 292 372 IPR003245 GO:0009055
Glsi14g1417 483 SUPERFAMILY Cupredoxins 280 378 IPR008972 -
Glsi14g1417 483 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 8 239 - -
Glsi14g1417 483 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Glsi14g1417 483 FunFam Blue copper 279 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1417 Glsi-ChrGlsi14 14767887 14770393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1417 1 239 Pollen Coat Proteome AT4G20670 37.549 6.51e-46 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1417 14 14767887 14770393 Glsi14g1417 14 14767887 14770393 ECH