Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1409 ATGGAGAATCATTTTCCCTCAGGTTATTCCACCGGTGACGGCTCCTCCTCCTCTTCCTTCGACCCCATGTTTTCCGGCGTCAGCCTTCAGTCCATTCTCAGCCTCAACCCCTCCGTCTTTTCTGATTACAACGCCGCCGGCATTTCCAGTTTCGCCTTCCTTGCCGATGATTCTCTGTCTCTGAATCTAAATCAACTCACTCAGGGCTCTAACATTGAGGACCACATGGCAGAGACAGAAGAGAAGAAGCCTATTGTGCTCAAAACTGAGCCCTGTCTCTTCGAAGAGGATGCGACCTGTGGGACCACTTCTCACCCCTTCGACTTCTTCTCAAACTGCCCTTCGAAATTTTACGACTCACCAACCTTCCAACTTCTCCCTGAACTCCATTCTATGGAGTCTTTTGCTCAGAAACGCCGTCGTTTCGACTCACTCACTTCTGGTCCCAACATGGTGACGCAGGCACCCCACAGTCTTCACCCTGCCATCGTCAACAATCTCCTCGCTGTCGTGCCGCCATACAACAGCAAACCAGCTTCTTCTTCGTTGGATGCTCCGGTTGGTGAAAAAGCCCCTCCGGTGATCCCTCAGAGCAACCTGGCCCGTCAGCGGCGGCAGAAGCTCAGTGACAAGACTCGGTGCTTGCAGAAACTGATGCCTTGGGACAAGAAGATGGACCAAGCAACCCTGCTGGAGGAAGCCTACAAGTACGTGAAATTCCTGCAGGCCCAGTTCTATGCCCTCCAATCCATGCCCTCTGACTCGCCTTTCCTAACCCACAATGATTCCAAACCCGCCCTTCAAAATGGTGATGTATTTGGTGATTTGGAAAGGTTAAACCGTAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCTGTTGCTCAAACCATGCTGTACTCGCAAGGTTTCTGTGTGTTCTCTATGGAACAGTTAAATTTGCTGAAGAACATCTCCGGGAGGAGGCGTCTTCTACAGCAGATGATGTCTGATAATGCTTCTTCGAAAGCTTTCCTTAACTAA 1020 0.5088 MENHFPSGYSTGDGSSSSSFDPMFSGVSLQSILSLNPSVFSDYNAAGISSFAFLADDSLSLNLNQLTQGSNIEDHMAETEEKKPIVLKTEPCLFEEDATCGTTSHPFDFFSNCPSKFYDSPTFQLLPELHSMESFAQKRRRFDSLTSGPNMVTQAPHSLHPAIVNNLLAVVPPYNSKPASSSLDAPVGEKAPPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFYALQSMPSDSPFLTHNDSKPALQNGDVFGDLERLNRNQVLQVLVNSPVAQTMLYSQGFCVFSMEQLNLLKNISGRRRLLQQMMSDNASSKAFLN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1409 339 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 171 316 IPR045843 GO:0003700|GO:0006355
Glsi14g1409 339 Pfam Helix-loop-helix DNA-binding domain 202 242 IPR011598 GO:0046983
Glsi14g1409 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 250 IPR036638 GO:0046983
Glsi14g1409 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Glsi14g1409 339 SMART finulus 198 247 IPR011598 GO:0046983
Glsi14g1409 339 Gene3D - 197 255 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1409 Glsi-ChrGlsi14 14726763 14727782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1409 204 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 47.826 9.94e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi14g1409 HLH 0.00028 No_clan