Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1407 ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGCAGCAGCAGCAGCAGCAGCATATTATGGAGAGATTGCCAAATGCAGAAAAAACACTTTGCGGAGGCAAGAATGGAAACATGTTCAATTCTAAGTTGCTCAAGTTTGCTGACAGTGAGCGGAAGAGGAAGATGAAGGCGAAGAAAGAGGAGCCAGCAAAGAAAGCTCAGGTGGAAGGGCGTGAATTGGTATTGGACAGAGTAAACAAGAGCAACAACGAACTCGAGAATGATGAAATCTACGTGGAGAAGGTGGAAAAGGAAGAAGTGGAAGAGGGTGAACTGGGCACTATGAAGTGGACAAGAAATGACCTTGAAAATGGAGAGTTTGTGCCGGAGAAGCCACGGAGAGGTGAAATTGAGAATGGAGAGATTATCAATGACAAACGGAAAAAAGCGGAGCTGGAGAAGGGAGAGATTGTCTCCGGAAAATGGAGAAGGGACGATGTGGAAAAGGGGGAGATAGTTCCTGAGAGAGGTAGGAAAGGAGAGGCTGAGAAAGGGGAATATGGGTCGTGGAGAGGCATAAAGGATGACGTTGAGAAGGGAGAATTCATTCCAGATAGATGGCATAGAGGAGACGTGGCGAAGGATGATTATGGTTCCAGTAGAATGCGCAGGTATCAGTCTGGTAGGGACAAAGGGTGGAAGAGTGAACGTGAACGCACACCACCTTCTGGGAGATATACAGGTGATGATTATGTTAGAAAGAAAGAATCTAATAGAAATGGTAGTCAGCATGCAAAGAGTGCTCCCCGGTGGGAGAGTGGACAAGAGAGGCATATTAGGATCAGTTCAAAGATTGTGGATGAGGAAAAAAGTGAACATAGTAATGGTAGGAACCATGGTCGGGATTATTCTTCGGGTAGTCGGTTGAAGCGGCATGGTAATGATTCAGACAGCAGTGAGCGCAAGCATTATGGAGATTATGCTGGTTTAAAAAGTCGAAGGCTTTCTGATGATAGCTGTCGTCCTCTTTATTCAGAGCACTATTCTCGTCTCTCTGTGGAGAGGTCTTACAGAAATTCTTCAAAAATTTCAGCAGACAAGTATTCTTCCAGGAATCAAGAATCTTCTTTATCTACTAGACCAGCTTATGACAGGCATGGACGCACCCCTGGTCATTCTGAGCGATCCCCACGTGATCGAACAAGGTATTATGATCATAGGGATCGTACTCCAGTTCGTCGTGAGAAATCCCCCCATGGGCGTGAGAAGTCTCCATATGAGAGGAATTGGGACAGAAGCCGTCCCTATGATCATAAAGTAAGAAGTCCAAATTATGCTGAGCGGTCCCCACAAGATAGAGGTCGATATCATGATCGCACAGATAGGACTCCAAATTTAGTTGAACGATCCCCCTTTGATCGAACTAGGCAAAATAGTCATCGAGAAACAAGTTGTAAAACCATATCAAGTGAAAAGCACAACTCGCCATATAGTTGTAAGGATCATGAAGATAAGCACATCCAAAGGGAGTCAAATTGTTCAGGTACAGAATCTCAAAGTGAAAGAAATGTTCATGATATCAATGGGTCTTTTGAGAAAGACAATAGCCGGAAACTTGAAAAGGAACTGCAATGCTGCAGCCCAACTGTGAGTTGCAAAGAATCTCCCCACTTTGAGCCACCTTCTGAGGAGCTACTTTCTATGGAAGAAGATATGGACATATGTGATACTCCTCCACATGTTCCTGTGGTGACAGATTCGTCATCAGGGAAATGGTTTTACCTCGATTATAGTGGTGTAGAACATGGGCCTTGTAAATTATGTGACATCAAGGTTCTTGTTACTGAGGGGGCGCTGATGTCGGATCACTTTATCAAGCACCTAGATAGTGACAGATGGTTAACTGCTGAGAATGCAGCATCACCCTTGGCAGCTCAGAGTTTTCCGTCCATTGTGTCTGACACCATAACTCGGCTGGTAAGCCCTCCAGAAGCTCCTGGTAATATTTTGGTAGATACCGGGGATATCCTTCATTCTGGAGCTGAGAAATTTCAGGAGATGCCAGCTCCAATGCTGCAACAAATGGTATGCCATGATGACAGAGTGGTTGCATCTGAACCTTTAGAGGATCTCTGCATTGATGAAAGGGTTGGAGTTTTGTTAGAGGGTTATGACGTCATTCCTGGGAGGGAGCTTGAGGCAATACAAGAAGCTTTGCAAATAAATTTCGAATATGCAAATTGGGAGGGATTGGGAGACTATGAAGGTTTTCCTTGGCATGATGATTGCCTGAGTGAAGAATGTGATTCAAGAACTGATTTAGCATTAAGAGTCTCTGAGACTCAGTTAGGCATGCTCTCTGACAAGGATAATGGAGTTGCCTTCAGTGTCCCTGGTGACTGGTATTCTGCCCGTTGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATGTCCAAGATAAATCTTCCAGGAAGAAACTTGTCCTAAATGATGGGTTTCCATTATGCGAAATGGCAAAGTCTGGATGTGAAGATCCCCGCTGGCCTCGAAAAGATGACTTGTATTATCCTTCTCACAGCAGGAGGCTTGATCTCCCTCTTTGGGCTTTTTGTGCTGATGACAGGGTTGATTCCGGAACTGTGAGTAGATCGGTTCCAGGTAAACCTGTTTTTGTTAGAGGTGTGAAAGGAAATGTTCTTCCAGTGGTCAGGATAAATGCGTGTGTGGTCAAGGACCAGGGATCATTGGTTTCTGAGCCACGACACAAAATCCGAGGCCAGGATAAATATCATTCAAGGTCAACTCGCCCTTTCTCTTCAATCAGTGATAGCAAGAGATCATCCACCGAAGAAGATTCTCAGTCAAAAGCTGTTAGCTATCAAAGCTCTTTCCTGAGCATGGAATTTATCAATACCCCCAAAGACCGGCTCTGTACTGTCCATGACTTGCAGTTACATCTAGGTGATTGGTATTATCTTGATGGTTCTGGGCACGAAAGAGGGCCTTTATCTCTTTCAGAGTTACAGGTTTTAGTAGATCAAGGAATTATAAAAAAATATAGCAGTGTTTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACCTCTGCTGCAGAAACTTCTGATATCTGTCTTGGGAGCCACGAGGAAAGCAGTTCAACATCTGGCAAATGTTTTGGATTTCCGTTGCTGCAAACTCAAGATGTCTCATTCAGTGAACCTTACACAAATTACAGTTTATTTCATAGCATACACCCTCAGTTTGTTGGTTACACTCGTGGGAAGCTACATGAACTAGTAATGAAATCATATAAGAGTCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTGGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAAATGAAAAGCAAATATATTGGAAATCAGAAGGTGATGCACGTGCTGCAAAAAGAGCCCGGATGCTGGTTGATGATAGTGAAGAAGACAGTGATACGGAAGATGTTGACTTGACTCTCCAGAAGGATGAATCCACTTTTGATGATCTATGTGGTGATGCTACTTTCGATGGAGAAGAAAGTGTTATTACTGATTCTGAGGTGGGAAGCTGGGGCTTATTGGATGGTCATATGTTGGCACGAGTCTTCCATTTTTTGAGATCTGATTTGAAATCCCTTATCTTTGCTTCAATGACTTGCAAGCATTGGAGAGCTGCTTTCATGTTTTACAAGGAAGTTTCAAGACAGGTCAATTTGTCATCCTTGGGTCATTCTTGCACTGATTCCATATTGTGGAGCATAATGAATGGCTATGAGAAAGACAAGATCAGATCCATGATTCTAATTGGTTGCGCCAATGTTACTGCTAACATGCTTGAGAAGATTCTTCTTTCATTTCCTTTTTTATCTACGATAGACATTAGAGGATGCAGCCAGTTTAATGAGTTGATTCAGAAATTTATCAATGTTAAATGGATCAAGAGCCGAAGTTCACACATAACCAAAATTGCAGAGGAGCCATATAAAACCAGAAGCCTTAAACAGATCACTGAGCAAACATCATTTGTTTCCAAGACCAGCAGTCTTGGTACGATGGATGATTTTGGTGAACTGAAGGACTATTTTGATAGTGTGGATAAAAGAGACACAGCGAAGCAATTATTCCGTAGAAACTTATACAAGCGTTCAAAACTGTATGATGCCAGAAGGTCCTCTTCCATTTTATCTAGGGATGCTCGTACTAGACGATGGGCTATTAAGAAATCTGAAAATGGTTATAAGAGGATGGAGGAATTTCTTGTTTCTAGTCTGAGGGAAATTATGAAAGCAAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAGATTGAGGCTAAAATGAAATCTGGTTATTACAGTGGTCGTGGGTTGAGCTCTGTCAAGGCGGACATCAGTAGGATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGGTGACGCTGGTGATATGAATCATATTATCACGTTATTCATTCAGCTTGTGACGCGGTTGGAAGAGAGTTCTAAGTCTGCAAGTGACAGAGAATTGGCATTCTGTTCAACTTCCTCAAAGTATAAGAAGAATAAATTGGTGACTGAGAGGAAGTATAGGAGTAATGGAACACACATTAGTTTAGATAATGGAGAGTATGCTTCAGATAGAGAAATTAGGAGGCGTTTATTAAAGTTGAATAAGAAATCTATTGACTCAGAAGGTGAAACATCTGATGACCTTGATATTTCTTCTGAAGATGGCAAGAGTGACAGTGTGACTACAACCTCTAACACTGAAAGTGACCAAGAAGTCTGTTCAGAAAGTCAAATTAGGGAGTCTAGAGGAGATGGATACTTCGCACCTGATGAGGATTTGGATTTCACTACCGATGATCGTGAATGGGGTGCTCGCATGACAAAAGCAAGCCTGGTTCCTCCTGTTACTCGGAAATATGAAGTCATTGATCAATATGTCATTCTAGCTGATGAGGAGGACGTGCAGAGGAAGATGCGGGTCTCATTACCGGATGATTATGCAGAAAAGCTGAATGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTGCCTGAAGTCAAGGATTACAAACCGAGAAAACAGCTTGGAGATGAAGTTATTGAGCAAGAAGTTTATGGAATTGATCCCTATACTCACAATCTTTTACTTGATTCTATGCCAGAGGAGTTAGATTGGCCTCTACAAGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGGACTTTGAATCAGCTAGTTAGGCATTTTACAGGAACTGGAGCCACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGAAGAAATCAAAAGGTCTGCTGAGGAGGACTGTAATGCAAGGATGGTTAGAATTTGTCAAGGTATCCTAAAGGCCATAGACAGTCGTCCGGATGACAAATATGTAGCTTATAGAAAGGGCCTTGGCGTTGTTTGCAACAAAGGAGAAGGATTTGGTGAAGAAGATTTTGTTGTGGAGTTTCTGGGAGAGGTCTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGTTCTCTGCAGAAAAACAGCAAAGATCCAGCTCCGGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCACAAGGCTAACTATGCCAGCCGAATATGTCATTCATGCCGACCTAATTGTGAAGCGAAAGTTACAGCTGTTGATGGTCATTATCAAATCGGAATTTATACTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTATAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCGTCAGTGTGTTTGTGTGGAAGCCAAGTTTGCAGGGGGAGCTATTTGAATCTGACTGGTGAAGGGGCTTTCCATAAGGTTCTGAAGGAGAAGCATGGAATTCTGCATCGTCATAATTTGATGCTAGAAGCTTGTGAATTAAACTCTGTTTCAGAAGAGGACTATAATGATCTGGGAAGAGCTGGTTTAGGAAGTTGTTTGCTTGGTGGCCTGCCAGATTGGCTAGTTGCATATGCAGCTCGTCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAAGGCATAATCTGGAAGAGAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTGGAGAGGAGCGATGCTGAGGTCCAGGCTGAGGGTGTGTACAACCAAAGGCTTCAGAATCTGGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTGTTTTTGATGATCCACGGAAAGCACCACCTCCGCTTGAGAAGATCAGCCCTGAAGCAGCTGTTTCCATCCTCTGGAAGGGAGAGGGTTCATTTGTTGAAGAGCTTCTTCAGTGTATGACTCCTCACGTTGAAGAAGACATTTTGAATAATCTCAAGTCCAAAATTCACTCTCATGATCCTTCAGGCTCTGGAGATATTCAGAAAGAGCTTCGGAAATCTCTATTATGGTTGAGGGATGAAGTCCGGGATCTTCCTTGTACATACAAATGTCGGCATGATGCGGCTGCTGACTTAATTCATATTTATGCTTATACCAATTGCTTCTTTAGAATAAGGGAGTATCAATCTATTACTTCTCCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTATACTGACAAGTTGGGAGCAGGATTTCAGGAGTATCGGAAAACATATGGTGAAAACTATTGTTTAGGGCAGCTAATTTTTTGGCATAATCAGAGTAATGCAGATCCAGACTGTAGCCTTGCTAGAGTGCGCAGAGGTTGCTTGTCATTACCAGACGTTGGTTCCTTTTATGCCAAGGCTCTGAAGCCATCACGACATTGTATTTATGGTCCCAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCCCAGAGACGCTGGCCCAAAGACAGGATATGGTCATTCAAAAGCTCTCCAAAAATTTTTGGCAGCCCAATGTTAGATTCTGTTATAAGTAAAACTCCACTGGACAGGGAAATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCATGTGGGACAGGTGA 7098 0.4283 MGDGGVACMPLQQQQQQQHIMERLPNAEKTLCGGKNGNMFNSKLLKFADSERKRKMKAKKEEPAKKAQVEGRELVLDRVNKSNNELENDEIYVEKVEKEEVEEGELGTMKWTRNDLENGEFVPEKPRRGEIENGEIINDKRKKAELEKGEIVSGKWRRDDVEKGEIVPERGRKGEAEKGEYGSWRGIKDDVEKGEFIPDRWHRGDVAKDDYGSSRMRRYQSGRDKGWKSERERTPPSGRYTGDDYVRKKESNRNGSQHAKSAPRWESGQERHIRISSKIVDEEKSEHSNGRNHGRDYSSGSRLKRHGNDSDSSERKHYGDYAGLKSRRLSDDSCRPLYSEHYSRLSVERSYRNSSKISADKYSSRNQESSLSTRPAYDRHGRTPGHSERSPRDRTRYYDHRDRTPVRREKSPHGREKSPYERNWDRSRPYDHKVRSPNYAERSPQDRGRYHDRTDRTPNLVERSPFDRTRQNSHRETSCKTISSEKHNSPYSCKDHEDKHIQRESNCSGTESQSERNVHDINGSFEKDNSRKLEKELQCCSPTVSCKESPHFEPPSEELLSMEEDMDICDTPPHVPVVTDSSSGKWFYLDYSGVEHGPCKLCDIKVLVTEGALMSDHFIKHLDSDRWLTAENAASPLAAQSFPSIVSDTITRLVSPPEAPGNILVDTGDILHSGAEKFQEMPAPMLQQMVCHDDRVVASEPLEDLCIDERVGVLLEGYDVIPGRELEAIQEALQINFEYANWEGLGDYEGFPWHDDCLSEECDSRTDLALRVSETQLGMLSDKDNGVAFSVPGDWYSARWSCKGGDWKRNDDVQDKSSRKKLVLNDGFPLCEMAKSGCEDPRWPRKDDLYYPSHSRRLDLPLWAFCADDRVDSGTVSRSVPGKPVFVRGVKGNVLPVVRINACVVKDQGSLVSEPRHKIRGQDKYHSRSTRPFSSISDSKRSSTEEDSQSKAVSYQSSFLSMEFINTPKDRLCTVHDLQLHLGDWYYLDGSGHERGPLSLSELQVLVDQGIIKKYSSVFRKCDKLWVPVTSAAETSDICLGSHEESSSTSGKCFGFPLLQTQDVSFSEPYTNYSLFHSIHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKENEKQIYWKSEGDARAAKRARMLVDDSEEDSDTEDVDLTLQKDESTFDDLCGDATFDGEESVITDSEVGSWGLLDGHMLARVFHFLRSDLKSLIFASMTCKHWRAAFMFYKEVSRQVNLSSLGHSCTDSILWSIMNGYEKDKIRSMILIGCANVTANMLEKILLSFPFLSTIDIRGCSQFNELIQKFINVKWIKSRSSHITKIAEEPYKTRSLKQITEQTSFVSKTSSLGTMDDFGELKDYFDSVDKRDTAKQLFRRNLYKRSKLYDARRSSSILSRDARTRRWAIKKSENGYKRMEEFLVSSLREIMKANSCDFFVPKVAEIEAKMKSGYYSGRGLSSVKADISRMCRDAIKAKNRGDAGDMNHIITLFIQLVTRLEESSKSASDRELAFCSTSSKYKKNKLVTERKYRSNGTHISLDNGEYASDREIRRRLLKLNKKSIDSEGETSDDLDISSEDGKSDSVTTTSNTESDQEVCSESQIRESRGDGYFAPDEDLDFTTDDREWGARMTKASLVPPVTRKYEVIDQYVILADEEDVQRKMRVSLPDDYAEKLNAQKNGTEESDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEELDWPLQEKHLFIEDMLLRTLNQLVRHFTGTGATPMSYPLQPVIEEIKRSAEEDCNARMVRICQGILKAIDSRPDDKYVAYRKGLGVVCNKGEGFGEEDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFHKVLKEKHGILHRHNLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILRHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCVFDDPRKAPPPLEKISPEAAVSILWKGEGSFVEELLQCMTPHVEEDILNNLKSKIHSHDPSGSGDIQKELRKSLLWLRDEVRDLPCTYKCRHDAAADLIHIYAYTNCFFRIREYQSITSPPVYISPLDLGPKYTDKLGAGFQEYRKTYGENYCLGQLIFWHNQSNADPDCSLARVRRGCLSLPDVGSFYAKALKPSRHCIYGPRTVRSMLARMEKQPQRRWPKDRIWSFKSSPKIFGSPMLDSVISKTPLDREMVHWLKHRPAIFQAMWDR 2365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1407 2365 Gene3D SET domain 1778 1967 IPR046341 -
Glsi14g1407 2365 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 160 2365 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 117 529 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 264 338 - -
Glsi14g1407 2365 CDD SET_SETD2-like 1809 1957 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 915 949 - -
Glsi14g1407 2365 Pfam SET domain 1876 1935 IPR001214 GO:0005515
Glsi14g1407 2365 SUPERFAMILY SET domain 1810 1958 IPR046341 -
Glsi14g1407 2365 SMART set_7 1801 1941 IPR001214 GO:0005515
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 1566 1580 - -
Glsi14g1407 2365 Coils Coil 79 99 - -
Glsi14g1407 2365 ProSiteProfiles SET domain profile. 1796 1935 IPR001214 GO:0005515
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 348 376 - -
Glsi14g1407 2365 SUPERFAMILY F-box domain 1189 1230 IPR036047 GO:0005515
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 1566 1618 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 1581 1598 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 117 255 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 489 505 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 379 482 - -
Glsi14g1407 2365 MobiDBLite consensus disorder prediction 1599 1615 - -
Glsi14g1407 2365 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1946 2365 IPR045606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1407 Glsi-ChrGlsi14 14706530 14724788 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi14g1407 SET 1.5e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1407 14 14706530 14724788 Glsi14g1407 14 14706530 14724788 ECH