Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1401 ATGCACAAATTAGAGAAAACCCATACTAAAAGGGATGGATCTAAGTCCCTGGCCGATACACTGGCAAGATGGAAAGAATATAATGCCCGGCTAGACTCTTGTAATGATGAGGATAAGCCAATTCAGAAAGCTCCTGCCAAAGGTTCAAAGAAGGGATGTATGAAAGGTAAAGGAGGGCCTGAGAATTCTCGTTGTAACTACAGAGGTGTAAGGCAAAGAACATGGGGCAAGTGGGTTGCTGAAATTCGGGAGCCAAACAGGGGGAATAGGCTCTGGTTGGGTACATTCCCCACTGCCATTGGAGCTGCTCTTGCCTATGATGAAGCAGCAAGGGCAATGTATGGTTCTCGTGCCCGCCTCAACTTTCCCAATGTTTCAGTTTCCAATTTTTCGAAGGAATCTTCTAGAGATTCACCTGTTGCGAATCAATCTGTTTCTGCAACGACAACAGCACACAGAGAGTCCGTGATATCCCCAAGTGTATTGGAGGATAATGACAAGAAATCTGTTACCTTAAGTGTAAAACATGAGGAAGGAGAAGATGAATCAAGGATCACTTCCTCGCCGTCTTCATCGTCATCATCATGA 588 0.4507 MHKLEKTHTKRDGSKSLADTLARWKEYNARLDSCNDEDKPIQKAPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSRARLNFPNVSVSNFSKESSRDSPVANQSVSATTTAHRESVISPSVLEDNDKKSVTLSVKHEEGEDESRITSSPSSSSSS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1401 195 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Glsi14g1401 195 MobiDBLite consensus disorder prediction 129 167 - -
Glsi14g1401 195 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Glsi14g1401 195 PRINTS Ethylene responsive element binding protein signature 105 125 IPR001471 GO:0003700|GO:0006355
Glsi14g1401 195 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Glsi14g1401 195 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Glsi14g1401 195 MobiDBLite consensus disorder prediction 35 65 - -
Glsi14g1401 195 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Glsi14g1401 195 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
Glsi14g1401 195 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Glsi14g1401 195 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 180 - -
Glsi14g1401 195 MobiDBLite consensus disorder prediction 129 195 - -
Glsi14g1401 195 MobiDBLite consensus disorder prediction 168 184 - -
Glsi14g1401 195 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1401 Glsi-ChrGlsi14 14667458 14668045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1401 10 129 AP2-EREBP Transcription Factor Family AT2G40350 60.484 2.08e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi14g1401 AP2 3.2e-14 CL0081