Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1392 ATGAAGAACTGTGAACTGTGCAAGTTGCCGGCGAGGACCTACTGCGAGGCGGACCAGGCAAGCTTGTGCTGGGGCTGCGACGCTAAGGTCCACGGAGCTAACTTCTTGGTAGCTAGGCACTCCAGGACTCTTTTATGCCATGCGTGTCATTCTCTGACGCCATGGAAAGCCTCCGGTCCTAAGCTCGGAAACACTGTTTCTGTTTGCGAGAGTTGTGCTGGCGGAATGAAAGTTATGGGTGAAGAAGTGGCAGAGAGCGAAGGTGGCAATGACGACGAGATAGACACAGAGGACGATCTCGATCTCGACGACGACGACGATGATGATATCATAATTGGCGATGACGACGACGAAGACGAAGACGAGGTTGGCGGTGATGAGGATGGAGATAATCAGGTAGTTCCTTGGTCCTCCACGCCGCCTCCACCGGCTGCAAACTCCTGCAGTAGTGAAGAGTCATTTAGCAGGTGTCATAGCAGCAATAAAGATATTTCTGAAACAGTGACGACAATTTCGTTGAAACGAAGGCGTCAGGATGCATCGGATCAGGACGGTCCGAAGCGTTTGTGTTCTCAATGGAGATACGGCGCAGAGTTGAGAAAGCAGGTGGCCTGGTTAGCGTATGAAGGCGGTGAAGGACCATCGATGGAATTGCCGAGGCCTTCGAAAGATGCAGAAAGCGGATCCCATTCGGCGTCGTCGGAAGAATCCCTGAATACATTGAACGGCTCACAAAGTTCCAGTGATGGCAAAACACCGGAAACCGTTTGA 771 0.5201 MKNCELCKLPARTYCEADQASLCWGCDAKVHGANFLVARHSRTLLCHACHSLTPWKASGPKLGNTVSVCESCAGGMKVMGEEVAESEGGNDDEIDTEDDLDLDDDDDDDIIIGDDDDEDEDEVGGDEDGDNQVVPWSSTPPPPAANSCSSEESFSRCHSSNKDISETVTTISLKRRRQDASDQDGPKRLCSQWRYGAELRKQVAWLAYEGGEGPSMELPRPSKDAESGSHSASSEESLNTLNGSQSSSDGKTPETV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1392 256 SMART bboxneu5 1 45 IPR000315 GO:0008270
Glsi14g1392 256 MobiDBLite consensus disorder prediction 211 256 - -
Glsi14g1392 256 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Glsi14g1392 256 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 199 - -
Glsi14g1392 256 MobiDBLite consensus disorder prediction 226 256 - -
Glsi14g1392 256 MobiDBLite consensus disorder prediction 82 190 - -
Glsi14g1392 256 CDD Bbox1_BBX-like 4 45 - -
Glsi14g1392 256 MobiDBLite consensus disorder prediction 143 168 - -
Glsi14g1392 256 MobiDBLite consensus disorder prediction 85 128 - -
Glsi14g1392 256 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1392 Glsi-ChrGlsi14 14619443 14620383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1392 2 143 C2C2-CO-like Transcription Factor Family AT4G27310 48.171 3.91e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi14g1392 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1392 14 14619443 14620383 Glsi04g0683 04 4811247 4811932 CCT
Glsi14g1392 14 14619443 14620383 Glsi14g1392 14 14619443 14620383 ECH