Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1386 ATGAAGAAACCGTGGTTCAGGTTTTCTGTTCTCATCCTCTGCTTCTCTTTTCACACCGACCCTTCCCTTGGAGCTTACATCGCCATCACTGCAAATCAATCTCTTTCTGGTGATCAAACTCTCATCTCTGAAGGCGGGGTCTTTGAATTGGGTTTCTTCAACTCAGGTACCTCCTCTAACTACTACATAGGCATCTGGTACAAAAAGGTCTCTCAAAAGACCGTTGTTTGGGCAGCAAACAGAGATAACCCAATCCCTGATAAATATTCTTCCAAGTTAGCAATATCGGGCGGTAATTTAGTTCTCTTCGACGAGTCTCAAATGCCCATTTGGTCAACTAATTTGAGTTCTCCCAGCTCAAGTTTTGCAGAAGCTGTCCTTCTAGATAGTGGGAATCTTGTTTTAAGAGATAGGCCTAATGCATCAGAGTTCCTATGGCAGAGCTTTGATCATCCAACTAATACATGGCTTCCGGGAGGTAAAATCATACTGGACAATAAAACAAAGAAGCCCCAATACCTCACTTCGTGGAAGAATAACGAGGACCCTGCACAAGGCCTCTTCTCGCTGGAACTAGACCCAAACGGAACCTCTTCATACTTAATTCTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGTCCTTGGAATGGACAGATTTTCAGCTTGGTTCCTGAAATGAGGTTAAATTATATCTACAATTTCACATTTGTGTCAAACGAGAACGAGAGCTATTTCACCTACTCCTTGTATAATTCTACTATTATATCCCGATTCGTGATGGATGTCTCGGGGCAGATCAAGCAATTCACATGGTTGGAAAGTTCCCAGCAATGGAATTTGTTTTGGTCACAGCCAAGACGACAATGTGAGGTTTATGCTTTCTGTGGTGCATTTGGAAGATGCACTGAGAATTCGATGCCATTCTGTACTTGTTTGACTGGTTTTGAGCCGAAGTTTCAGACTGACTGGAATCTGAAGGATTACTCAGGAGGGTGTGTGAGGAAAACGAAATTGCAATGTGAGACTTCTGATCCTAGAGGGGAGAAGGACAAGTTCCTGCCGTTGACCAATATGGCATTACCTAACCATGCACAATCTGTGGGAGCAGCCAATTCAGGGGAATGCACGTCAGCCTGCCTGAACAACTGCTCCTGCGCCGCTTATGCCTATGATAGTAATGGGTGTTCACTTTGGAATGGAGATCTCTTAAATCTGCAACAACTTTCTCAGGATGATAGCAGCGGAGAAACTTTATATCTCAAACTTGCAGCTTCTGAGTTTCCTGATCCTAAAAACAATAAGGGGAAGATTATAGGTATTGTTGTGGGCTCGGTTGGAGGTACAGTGGTTCTCCTAGCCCTTCTTCTGTTTGTCATGCTCAGGAGGAGAAAGAGAATAGTTGGAACAGGAAAATCGGTGGAGGGTTCGTTGATAGCATTTGGGTACAGAGATTTGCAAAATGCAACAAAGAATTTCTCTGAGAAATTGGGAGGAGGAGGTTTTGGTTCCGTGTTCAAGGGAACATTGCCGGATTCCAGTGTCATAGCGGTGAAGAAGCTGGAAAGCATTAGCCAAGGTGAGAAGCAGTTCCGGACAGAAGTCAGTACAATTGGGACAATCCAACATGTTAATCTTGTTCGGCTTCGAGGGTTCTGTTCTGAAGGAGCCAGAAAACTGCTGGTTTATGATTACATGCCAAATAGCTCTTTGGATTCCCATCTGTTTCAGGAAAAGAATTCTCAGGTATTGGACTGGAAAATAAGATACCAAATTGCTCTGGGAACAGCTAGGGGATTAACTTATCTCCACGAGAAGTGCAGAGACTGTATCATACACTGCGACATAAAGCCAGAGAACATACTCCTAAATGCTGATTTTTGTCCAAAAGTGGCCGACTTTGGCCTGGCAAAACTAGTTGGACGGGATTTCAGTAGGGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCGGAGTGGATTTCCGGGGTGCCTATCACAGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTTGAATTTGTATCAGGTAGGAGGAACTCTGAGCCATCTGAAGACGGCCTCGTTAGATTCTTTCCTACTTGGGCCACAAATATAGTAATCCAAGGAGGCAATGTCCTTAGCCTGTTAGATCCTAGGTTGAAGGGAAATGCAGACATAGATGAGGTGACTCGAATAGTAAAAGTCGCTTGCTGGTGTGTCCAAGATGATGAAACTCAGCGGCCATCCATGGGTCAGGTAGTTCAAATACTTGAGGAGGTCTTGGATGTGAATTTGCCTCCAATCCCAAGATCCCTCCAATTGCTTGTTGAGAACCAGGAGAACATAGTTTTCTTCACCGACTCAAGCTCCTCCCAGGGCTCACAGGTAAAGAGCAACGTTTCAACAGCCTCCTCTTAA 2430 0.4424 MKKPWFRFSVLILCFSFHTDPSLGAYIAITANQSLSGDQTLISEGGVFELGFFNSGTSSNYYIGIWYKKVSQKTVVWAANRDNPIPDKYSSKLAISGGNLVLFDESQMPIWSTNLSSPSSSFAEAVLLDSGNLVLRDRPNASEFLWQSFDHPTNTWLPGGKIILDNKTKKPQYLTSWKNNEDPAQGLFSLELDPNGTSSYLILWNKSEQYWTSGPWNGQIFSLVPEMRLNYIYNFTFVSNENESYFTYSLYNSTIISRFVMDVSGQIKQFTWLESSQQWNLFWSQPRRQCEVYAFCGAFGRCTENSMPFCTCLTGFEPKFQTDWNLKDYSGGCVRKTKLQCETSDPRGEKDKFLPLTNMALPNHAQSVGAANSGECTSACLNNCSCAAYAYDSNGCSLWNGDLLNLQQLSQDDSSGETLYLKLAASEFPDPKNNKGKIIGIVVGSVGGTVVLLALLLFVMLRRRKRIVGTGKSVEGSLIAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGARKLLVYDYMPNSSLDSHLFQEKNSQVLDWKIRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLNADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVPITAKADVYSYGMMLFEFVSGRRNSEPSEDGLVRFFPTWATNIVIQGGNVLSLLDPRLKGNADIDEVTRIVKVACWCVQDDETQRPSMGQVVQILEEVLDVNLPPIPRSLQLLVENQENIVFFTDSSSSQGSQVKSNVSTASS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1386 809 Gene3D - 26 150 IPR036426 -
Glsi14g1386 809 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1386 809 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Glsi14g1386 809 SMART blect_4 32 152 IPR001480 -
Glsi14g1386 809 Gene3D Transferase(Phosphotransferase) domain 1 566 769 - -
Glsi14g1386 809 PIRSF SRK 2 809 IPR024171 GO:0004674
Glsi14g1386 809 FunFam Serine/threonine-protein kinase 566 769 - -
Glsi14g1386 809 CDD STKc_IRAK 497 763 - -
Glsi14g1386 809 FunFam Serine/threonine-protein kinase 458 565 - -
Glsi14g1386 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Glsi14g1386 809 Pfam D-mannose binding lectin 74 178 IPR001480 -
Glsi14g1386 809 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Glsi14g1386 809 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1386 809 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Glsi14g1386 809 Pfam PAN-like domain 348 405 IPR003609 -
Glsi14g1386 809 PANTHER OS07G0415500 PROTEIN 11 773 - -
Glsi14g1386 809 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Glsi14g1386 809 FunFam Serine/threonine-protein kinase 22 149 - -
Glsi14g1386 809 CDD B_lectin 32 152 IPR001480 -
Glsi14g1386 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Glsi14g1386 809 CDD PAN_AP_plant 337 424 - -
Glsi14g1386 809 SMART serkin_6 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1386 809 SUPERFAMILY Protein kinase-like (PK-like) 476 795 IPR011009 -
Glsi14g1386 809 SMART ntp_6 348 423 IPR003609 -
Glsi14g1386 809 Gene3D Phosphorylase Kinase; domain 1 459 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1386 Glsi-ChrGlsi14 14587932 14590361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1386 472 771 Receptor kinase-like Gene Family AT5G20050 43.671 4.86e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi14g1386 Pkinase 2.5e-46 CL0016