Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1384 ATGGTGAGAACCCCTTGCTGTGACAAAAGTGGACTGAGGAAAGGTACCTGGACACCAGAGGAAGATAGGAAGTTAATTGCCTACGTTACTAGGTATGGTTGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTAGCAAGGTGTGGAAAGAGTTGCAGACTGAGATGGCTTAATTACCTAAGGCCAAACATCAAAAGGGGCAACTTCACTCAAGAAGAAGAAGAAACCATTATCAAGCTGCACCACAAGCTGGGAAACAGATGGTCTGCGATTGCCGCTGAGTTTCCAGGAAGAACAGACAATGACATAAAGAATCACTGGCACAGCAACCTCAAGAAGCGCTACCAACACAACTCAACGACAGTACATGAAAATGGCGGCAAAGTTTCCGAGTCAAAGGATGTCTCCCAAGTTGAATCCCAATCATTGCCAATTCCAAACATTAATAATGCTTCTTTTCAAAGCTCATCGGCTACTAACCAGATCGGCCAATCTTGCCCACTGTCACCGCAGTCATCGTCAAGCGAACTCTCCTGCATAACCACAGAGACCACAGCAGGAAGTAACGAAAATTTGGTTATGGAAGATGAGTTTGCTTTTCTGGAAGCCATGAACGGAAATTTCTGGACAGAACCATATGTGGCTGACATTTCCTACGTCCCTCTGCCACCCTTGCCAACAGAATCCCAATACTTTAGTCCGTTGTGTGGTGCCGAACTTTGGAGTCCAAATAATTTGTATGACGAATATGCTGGCTTATTCTAA 768 0.4557 MVRTPCCDKSGLRKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPNIKRGNFTQEEEETIIKLHHKLGNRWSAIAAEFPGRTDNDIKNHWHSNLKKRYQHNSTTVHENGGKVSESKDVSQVESQSLPIPNINNASFQSSSATNQIGQSCPLSPQSSSSELSCITTETTAGSNENLVMEDEFAFLEAMNGNFWTEPYVADISYVPLPPLPTESQYFSPLCGAELWSPNNLYDEYAGLF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1384 255 CDD SANT 69 112 IPR001005 -
Glsi14g1384 255 Gene3D - 68 140 - -
Glsi14g1384 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 184 - -
Glsi14g1384 255 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi14g1384 255 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Glsi14g1384 255 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Glsi14g1384 255 CDD SANT 16 61 IPR001005 -
Glsi14g1384 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Glsi14g1384 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Glsi14g1384 255 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Glsi14g1384 255 FunFam Transcription factor RAX3 7 67 - -
Glsi14g1384 255 Gene3D - 14 66 - -
Glsi14g1384 255 SMART sant 13 63 IPR001005 -
Glsi14g1384 255 SMART sant 66 114 IPR001005 -
Glsi14g1384 255 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1384 Glsi-ChrGlsi14 14578397 14579494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1384 1 217 MYB Transcription Factor Family AT2G31180 47.032 2.73e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi14g1384 Myb_DNA-binding 8.5e-13 CL0123