Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1383 ATGGTGAGAACGCCTTCCTTGAGCACGAGTGGACTGAAAAAAGGTACCTGGACACCAGAAGAAGACAGAAAGCTAATTGCTTATGTTACAAGGTATGGCTGCTGGAATTGGCGTCAACTTCCCAAGTTTGCAGGTCTGGCAAGGTGTGGAAAGAGTTGCCGACTTAGGTGGATGAATTATCTAAGGCCCAACCTCAAAAGAGGAAACTACACTCAGGAAGAAGAGGAGATTATTATCAACATGCAAAAAAAGCTGGGCAACAGATGGTCTGTGATTGCAGCTCATTTACCAGGAAGGAGTGATAACGAAATTAAGAACCACTGGCACACCACCCTCAAGAAGAAGCGCCACTCACTCACAAATGAACTCATCTCCAACTCAACGCCAGACGATGGTTCTTCTCAAAGTGCTTCCCAAATTCCCGATTCTTGCCCATTGTCTCCGCAGTCATCCTCCAGCTGCATAACCACAGTTGCTAGTCATGAAAATTTAATTCTGGAAAGTGACTTCGTTTTTCTGGATGCTAATTACACAGAGCCAAATATGGGTAATATCTTTGACGCTGGTACTTGTCAAACTCCAGCCACAACCCAGATCCCGGATACCTCACAGCTATGGTCCACAGGAAGTTTGGTTGTGGAGCAGGATGACTTTGCTTATCTGGATGCACTTTCGGTTTCAGAGGCAGCAATTTATAATTTCTGGACAGACCCATATTTGGCTGACTTGTCCCACGTCGTTCCAACAGATCAATCACTGACAACGTTGTTGGATTTAGATCTTTGGAGTCAAAAGATGGTGAGAACTCCTTTCTATGACAAAAATGGAGTGAAGAAAGGTGCGTGGAGTAAAGAAGAGGATGACAAACTACGAGCTCATATTCAGAAATATGGCCATCGCAATTGGCGCCAACTCCCCAAGTCTGCAGTGTCTGTTCGCAGATGGTCTTTGATTGCTGAACAACTCCCTGGACGAACGGACAATGAGATAAAGAACCATTGGCATAGCCAACTAAAGAAGAGCTTAAAGCGCAATGACACCAGATCGGAGTTCAAATCGAAGCCAAGTGATGCTTCTGAAGGAAAAACAACTCAGAGTAAAGAATCTGAAAGCCCAGGTGTTTTTGTTGGTGCTGATTACCACCATATTTTGGAGAGCTCATTGGCCACCATGTCCATTGAAACCTCCTACACCGAAGAAAACTACTCTTCCTTGATCTCAACTGATGCACAATCAACCATAAACTTGTGCAGAGAAGAGGAAAGTGTTGCTTCCTGGGAAACTTTACAAGAATTTAGCAGTGATTTTTGGAGTAGACCATTTATAGTAGAAAATACATGTAGTTATGAGATAACTATAGTTGAAGACATTGCCCCAGTATTTTCATACCCCTACGAGGGTGCATATTTGAGTGAGGTTCCAGCTAATCTAGATTTTTGGGTCCTATTGCAAAAATGCAACTATACCAATGTGTGTAAACAAGGTTTGAGATGGCTCCATGAAGGACCAGGCGTTCGAATAAACAAAGCTAAAGATATGCCAATTACCAAATGCTTGACTTATTCACTATGA 1572 0.4313 MVRTPSLSTSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNYTQEEEEIIINMQKKLGNRWSVIAAHLPGRSDNEIKNHWHTTLKKKRHSLTNELISNSTPDDGSSQSASQIPDSCPLSPQSSSSCITTVASHENLILESDFVFLDANYTEPNMGNIFDAGTCQTPATTQIPDTSQLWSTGSLVVEQDDFAYLDALSVSEAAIYNFWTDPYLADLSHVVPTDQSLTTLLDLDLWSQKMVRTPFYDKNGVKKGAWSKEEDDKLRAHIQKYGHRNWRQLPKSAVSVRRWSLIAEQLPGRTDNEIKNHWHSQLKKSLKRNDTRSEFKSKPSDASEGKTTQSKESESPGVFVGADYHHILESSLATMSIETSYTEENYSSLISTDAQSTINLCREEESVASWETLQEFSSDFWSRPFIVENTCSYEITIVEDIAPVFSYPYEGAYLSEVPANLDFWVLLQKCNYTNVCKQGLRWLHEGPGVRINKAKDMPITKCLTYSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1383 523 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 314 408 - -
Glsi14g1383 523 MobiDBLite consensus disorder prediction 337 372 - -
Glsi14g1383 523 MobiDBLite consensus disorder prediction 123 145 - -
Glsi14g1383 523 CDD SANT 69 112 IPR001005 -
Glsi14g1383 523 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi14g1383 523 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Glsi14g1383 523 Pfam Myb-like DNA-binding domain 279 337 IPR001005 -
Glsi14g1383 523 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Glsi14g1383 523 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Glsi14g1383 523 CDD SANT 281 335 IPR001005 -
Glsi14g1383 523 CDD SANT 16 61 IPR001005 -
Glsi14g1383 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Glsi14g1383 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Glsi14g1383 523 SUPERFAMILY Homeodomain-like 267 349 IPR009057 -
Glsi14g1383 523 MobiDBLite consensus disorder prediction 337 364 - -
Glsi14g1383 523 Gene3D - 277 344 - -
Glsi14g1383 523 SMART sant 13 63 IPR001005 -
Glsi14g1383 523 SMART sant 278 340 IPR001005 -
Glsi14g1383 523 SMART sant 66 114 IPR001005 -
Glsi14g1383 523 ProSiteProfiles Myb-like domain profile. 274 338 IPR001005 -
Glsi14g1383 523 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Glsi14g1383 523 Gene3D - 13 66 - -
Glsi14g1383 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 274 342 IPR017930 -
Glsi14g1383 523 FunFam MYB-related transcription factor 13 66 - -
Glsi14g1383 523 Gene3D - 69 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1383 Glsi-ChrGlsi14 14564340 14571905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1383 266 434 MYB Transcription Factor Family AT2G31180 31.797 3.07e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi14g1383 Myb_DNA-binding 3.1e-12 CL0123