Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1367 ATGCCCTATGATTCCACCAATGATGTTACAATCCAACTTGTCCGAGGTTGTAGTATACCCAAGGCCCTGATCTTCAGGGCGAACCTACTTGGTGTTGCTACACTTCCAATGACATTAAAGGTTTTAACTGAGAGGTTAAAGCGAGAGATGAAGCAGGTGGCATGGTGCATGACCTTTAGTGTTCTAGGGCGTCTTTTTCCTAAGTTGGCTTTAAGGTCATTCTTCAGCAGGGCTTCCAGAGCTTTTCATAGCTACCCTTCATGCTCTAAGCTTCTGCTCTTCTGCACTCTAAGTGGTGGGGGTGTGGTGGCATACTCAGAATTACAATCAGAAACTGGACCTCCAAGAATTGACCCCAATGAGCCCAGGAAAAAGAGATTGGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATGTGGATGCTTCATTATATGATGTGCAGGTTGTTTCGCCTCGTAACTACTTTGCATTCACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCTCGAAGCATTGTGGAGCCAGTCCGAAACATCATTAAAAAGAGAAATGGAGAAATTAAATTTTGGGAGGCAGAATGCGTCAAGATTGATGCTGCAAACAAAAAGGTTTTCTGTCGGTCCAATATTGACAACAACTTAGTGGGAAGTGGCGATTTTTCTCTGGAATATGACTTATTGGTTGTAGCATTAGGAGCACAAGTAAATACTTTTAACACCCCTGGTGTCAAGGAGAACTGTCACTTTCTCAAGGAGGTGGAGGATGCTCAGAGGATCAGAATTTCTGTGATAGACTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCCGAAGAAGAGCGAAGGACAAATCTTCATTTTGTAATTGTTGGAGGGGGTCCAACTGGTGTTGAATTTGCGGCAGAGCTGCATGATTATGTCCAGGAAGATTTAATTAAATTATATCCATCTGTTAAAGATATAGTGCGAATAACAGTGATTCAGTCAGGAGATCATATCTTGAACACGTTTGATGAAAGAATCAGTTCATTTGCGGAGCAGAAGTTTGGAAGAGATGGTATAGAAGTTCAAACAGGATGCCGGGTGGTCGAAGTCACTGACAAGGAAATTTTAATGAAGCTGAAATCAACGGAAGAACTTTGCTCTGTACCTCATGGATTGGTAGTCTGGTCTACTGGCATTGGGACTCTTCCAGTTGTGAGGGACTTAATGGAACAAATCGGGCAGGCTAAAAGAAATGTCCTAGCGACTGATGAATGGTTGCGCGTGAAGGGATGCGAAGCTGTGTATGCCATTGGTGATTGTGCTACAATAAATCAACGTAGAATCATGGATGATATCTCGGCCATATTTGAAGCTGCAGACAAAGACAACTCCGGTACCTTAACTGTTGAAGAATTCGAGGATGTGATTGATGACATCATCGTAAGATATCCCCAAGTTGAACTTTATATAAAGAGCAAACATCTATTTGATGTGACTGCTCTTTGGAAAGATCCGCAAGGGAATGACAACGATGAAATAGACATAGAAGGGTTCAAGCTGACCCTTTGTCATGTTGATTCACAGATGAAGAGTCTGCCAGCAACAGCACAGGTTGCTGCCCAACAAGGTACATATCTAGCTAGATGCCTTAACCGCAGACAGCAATGTGTAGAGAATCCTGAAGGTCCTCTGCGATTTAACAAGTCTGGACGCCATAAGTTTCGTCCCTTCCGGTATAAGCATTTTGGGCAATTTGCTCCTCTGGGTGGAGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAGTGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTGGTCATCTCTGATTGGACAAGAAGATTCATTTTTGGGAGAGATTCAAGTCGTATTTAA 1941 0.4379 MPYDSTNDVTIQLVRGCSIPKALIFRANLLGVATLPMTLKVLTERLKREMKQVAWCMTFSVLGRLFPKLALRSFFSRASRAFHSYPSCSKLLLFCTLSGGGVVAYSELQSETGPPRIDPNEPRKKRLVVLGTGWAGTSFLKDVDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRNGEIKFWEAECVKIDAANKKVFCRSNIDNNLVGSGDFSLEYDLLVVALGAQVNTFNTPGVKENCHFLKEVEDAQRIRISVIDCFEKAVLPSLSEEERRTNLHFVIVGGGPTGVEFAAELHDYVQEDLIKLYPSVKDIVRITVIQSGDHILNTFDERISSFAEQKFGRDGIEVQTGCRVVEVTDKEILMKLKSTEELCSVPHGLVVWSTGIGTLPVVRDLMEQIGQAKRNVLATDEWLRVKGCEAVYAIGDCATINQRRIMDDISAIFEAADKDNSGTLTVEEFEDVIDDIIVRYPQVELYIKSKHLFDVTALWKDPQGNDNDEIDIEGFKLTLCHVDSQMKSLPATAQVAAQQGTYLARCLNRRQQCVENPEGPLRFNKSGRHKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSRI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1367 646 Pfam Pyridine nucleotide-disulphide oxidoreductase 126 449 IPR023753 GO:0016491
Glsi14g1367 646 PRINTS FAD-dependent pyridine nucleotide reductase signature 127 146 - -
Glsi14g1367 646 PRINTS FAD-dependent pyridine nucleotide reductase signature 291 309 - -
Glsi14g1367 646 PRINTS FAD-dependent pyridine nucleotide reductase signature 230 248 - -
Glsi14g1367 646 SUPERFAMILY FAD/NAD(P)-binding domain 289 444 IPR036188 -
Glsi14g1367 646 SUPERFAMILY EF-hand 404 532 IPR011992 -
Glsi14g1367 646 Gene3D - 502 645 - -
Glsi14g1367 646 Gene3D - 115 463 - -
Glsi14g1367 646 SMART efh_1 451 479 IPR002048 GO:0005509
Glsi14g1367 646 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Glsi14g1367 646 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 116 476 - -
Glsi14g1367 646 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 493 645 - -
Glsi14g1367 646 SUPERFAMILY FAD/NAD(P)-binding domain 124 343 IPR036188 -
Glsi14g1367 646 PANTHER NADH DEHYDROGENASE 120 646 IPR045024 GO:0003954|GO:0006116
Glsi14g1367 646 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1367 Glsi-ChrGlsi14 14439212 14447197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1367 73 646 Chloroplast and Mitochondria Gene Families AT4G21490 64.706 0.0 778