LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi14g1351	ATGGGTGGGAAGAGATCTGCTTTAGAGTACAAGAGAGTGAAGATCTATGGACAAGTCTTATTTGGTTATATGTTGATCTGCACAGTTCAGTTTTCGCGTGCAGACACTAATCCCACTGATGTTGCTGCTATCAATAGCTTATATGCTGCACTGGGCTACCCTGTTCTCCCTGGGTGGGTTCCTAATGGAGGAGATCCATGCGGACAAGCATGGCAAGGCCTTCATTGTAATGATTCAGTTATACAGAGCATAGTTTTGAATGGTGCAAACTTGGGAGGAGAATTAGGTGATAGCTTGGGAACATTTGTTTCTATCAGAGTAATAGATCTAAGCAACAATCACATTGGAGGAAGTATACCATCCAGTTTGCCAGTCACCATGCAAAACCTTTTTCTTTCAGATAACCAATTCACTGGAATTATTCCAGCTTCTTTATCCACATTGACTGAACTGACAGACATGTCTCTTAACGACAATCTTTTAACTGGAGAAATACCGGATGCTTTTCAATCACTTACACAACTGATCAATCTTGATCTATCTAGTAATAATTTGAGTGGGGAGTTGCCTCCATCTCTAGAGGACCTGTCAACTCTGACCACCCTACGCTTACAGAATAATCAACTGTCTGGGACCCTTGATGTTTTACAAGACCTTCCACTAAAAGATTTGAATGTAGAGAACAACCAGTTCGCTGGACCGATACCTCAAAAATTGCTAAGCATCCCAAATTTCAGAAAAGATGGAAACCCATTCAATGTTAATACTACTATAGCTCCAGCTCCTCCCTCTCATTCTCCAGTGACAGCAACACCAGGAACACTGGTTTCTGGAGCGCCATCTTCTGGACGTGTACCTACTAAACAGGCTGAGGGACCAACTGCAACAAAGGAATCAAATTCTGGAAAATCGAAAAAAAATACCAAAAGGGTGGTTTGGATATCTATTGCTGGCATATTAGTATTTTTTATTTTGGCACTAGGACTCGCTCTCTTTATTCCAAAATGTGGCAGAAGGGAAAGGGTTGACAGAATTTCCAAGCAACATCAAATTGATACATATGGCGGAGACAAAGAGAGGGATTATGGGGCTCTAGCCCAACCACCTGCTCAAACTGAGAAAGGCAAATATATATTACCAAAAGGGGCTGTTCTGAGGGCAAAAGATCATCAAGCAGAGACCAGGAAAGAGGGGGCTATTCTGAAGCCACAGGATGAGCAAGAGAAGGATGTACTAAGAATGAGCAAGATACCAAAACTGGGGGATCATAATATAGATATGAGTGCACTAGATATATGTTCAATGTCTCCTCCACCCGCACCCCATCCTCCTCCTCCTCCACCCGCACCCCATCCTCCTCCTCCTCCACCACAACCTCATGCTAAGAGGGTGATTGTTGAACCAATCACATTCTACAAAGGGACTACTGTCAATCCTTCCATAAAAAGTCTAGTTCCTCCCTCTTTTGCAAAATCTTTCACCATTGGATCCCTTCAGCAGTTTACTAACAGTTTTTCTGAAGAAAATCTTATTGGAGGAGGCATGCTGGGAAGTGTTTATAGGGCAGAGCTTCCTGATGGCAAGCTACTTGCTGTGAAGAAACTGGACAAGAAAGCTTCTGATCACCAAAAGAATGAGGAGTTTCTTGAATTGGTAAACAGTATTGACAGAATTAGGCATGCCAATGTTGTTGAGCTTATTGGCTACTGTGCAGAGCATGGTCAAAGGCTTTTGATCTATGAGTACTGCAGTAATGGGTCACTGCATGATGCACTCCATTCAGATGATGAATTCAAAACAAGACTGTCTTGGAATGCTCGCATTCGGATAGCACTTGGTGCAGCTAGAGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCTGTTGTGCATAGAAATTTCAAGTCTGCCAATGTTCTTCTTGATGATGATCTATCTGTGCGTGTATCTGACTGTGGTTTGGCTGCATTGATAGCTTCAGGTTCTGTAAGTCAGCTCTCTGGGCACCTGCTCACAGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAGAGTGACGTGTACAGCTTTGGAGTGGTTATGTTAGAACTATTGACCGGCCGACAATCCTATGACAGGACGCGCACCCGAGGAGAGCAGTTTCTAGTGAGATGGGTAATTTCACAACTTCATGACATTGATGCCTTATCAAGGATGGTTGATCCTTCTCTCAAAGGAGATTACCCAGTCAAATCATTGTCAAACTTTGCAGACATTATTTCTCAATGTGTCCAGTCCGTGCCAGAATTTAGGCCACCAATGTCAGAGGTGGTCCAGTCCTTGTTAAATATGATACGTAGGGAGTCTCACAAAAGTGAATCAACTGAAGAATGA	2382	0.4307	MGGKRSALEYKRVKIYGQVLFGYMLICTVQFSRADTNPTDVAAINSLYAALGYPVLPGWVPNGGDPCGQAWQGLHCNDSVIQSIVLNGANLGGELGDSLGTFVSIRVIDLSNNHIGGSIPSSLPVTMQNLFLSDNQFTGIIPASLSTLTELTDMSLNDNLLTGEIPDAFQSLTQLINLDLSSNNLSGELPPSLEDLSTLTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPQKLLSIPNFRKDGNPFNVNTTIAPAPPSHSPVTATPGTLVSGAPSSGRVPTKQAEGPTATKESNSGKSKKNTKRVVWISIAGILVFFILALGLALFIPKCGRRERVDRISKQHQIDTYGGDKERDYGALAQPPAQTEKGKYILPKGAVLRAKDHQAETRKEGAILKPQDEQEKDVLRMSKIPKLGDHNIDMSALDICSMSPPPAPHPPPPPPAPHPPPPPPQPHAKRVIVEPITFYKGTTVNPSIKSLVPPSFAKSFTIGSLQQFTNSFSEENLIGGGMLGSVYRAELPDGKLLAVKKLDKKASDHQKNEEFLELVNSIDRIRHANVVELIGYCAEHGQRLLIYEYCSNGSLHDALHSDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKSANVLLDDDLSVRVSDCGLAALIASGSVSQLSGHLLTGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRTRGEQFLVRWVISQLHDIDALSRMVDPSLKGDYPVKSLSNFADIISQCVQSVPEFRPPMSEVVQSLLNMIRRESHKSESTEE	793

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi14g1351	793	Gene3D	Transferase(Phosphotransferase) domain 1	583	793	-	-
	Glsi14g1351	793	Pfam	Leucine rich repeat	127	185	IPR001611	GO:0005515
	Glsi14g1351	793	MobiDBLite	consensus disorder prediction	258	304	-	-
	Glsi14g1351	793	ProSiteProfiles	Protein kinase domain profile.	505	778	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi14g1351	793	SUPERFAMILY	L domain-like	36	244	-	-
	Glsi14g1351	793	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	583	791	-	-
	Glsi14g1351	793	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	473	582	-	-
	Glsi14g1351	793	Gene3D	Ribonuclease Inhibitor	38	257	IPR032675	-
	Glsi14g1351	793	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	37	264	-	-
	Glsi14g1351	793	SUPERFAMILY	Protein kinase-like (PK-like)	479	777	IPR011009	-
	Glsi14g1351	793	Pfam	Protein tyrosine and serine/threonine kinase	508	777	IPR001245	GO:0004672\|GO:0006468
	Glsi14g1351	793	MobiDBLite	consensus disorder prediction	430	461	-	-
	Glsi14g1351	793	MobiDBLite	consensus disorder prediction	436	461	-	-
	Glsi14g1351	793	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	26	166	IPR046959	-
	Glsi14g1351	793	Gene3D	Phosphorylase Kinase; domain 1	475	582	-	-
	Glsi14g1351	793	MobiDBLite	consensus disorder prediction	258	301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi14g1351	Glsi-ChrGlsi14	14346074	14354599	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi14g1351	31	788	Strubbelig Receptor Gene Family	AT4G03390	59.665	0.0	860

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Glsi14g1351		PK_Tyr_Ser-Thr	1.4e-42	CL0016