Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1338 ATGGAACTTAAACAGCTGGAGGCATTACTGAATAGCCAGGTAGATGTTTGGAAGCTCCTTTTTGGTTTTGTGGAATCTATGGCACTAAATTGTGCCGTAGAGCTCCGCATAGCAGATGTCATACACGCCCACGGTGCCCCTATCCCATTGTCAAAGATAGCTGCTTCCATAAACTCGCCCGCTCCAGGTATCTCTTACCTTGTTCGCATCATGAGATTGCTCGTACGTAAGAAGATCTTCACCGCCCATCATCCATCAGACGGCGGAGAAACCCTCTACGGGTTGACAGAGGCATCCAGGTGGCTTCTGCATGGCGCCCAGTTTAGCCTGGTTCCCATGATTTTAATGGAAAGCCATCCATGGCAACTGGCTCCATGGCATCACCTGAGCCAGTGTGTGAGAGATGGTGGAACTGCCTTCAACAAGGCTCATGGCTGCGACATATGGGACTTCGCATCTCAAAACCCAGAATTCAACAATCTATTCAATAACGCAATGCAAAGTGCAGCGAAGATCATTGTGGAAGCTATCCTGTGTGAGTATAAGGATGGGTTCAGCAGCATAGGATCGCTGGTAGATGTGGGAGGTGGGACAGGAGGATTCATAGCTGAGATCGTTAAATCACATCCACACATCAAAGGCATTAACTTTGATCTGCCACATGTCATAGCCACAGCGCAAGAGCACCAAGGTGTCACCCATGTGGGAGGCAACATGTTCGAGGGCTCCATTCCAAAGGCAGATGCAGTTCTTCTCAAGTGGGTACTACACGATTGGAGTGACGAGGATTGCATGAAGATATTGAACAAGTGCAAGGAAGCAATCCCAGAAAAGAATGGAAAGCTAATAATAGTGGACATGGTGTTAGAAACAGAGGGGAATGGAGCACTTGACGAGACAAGAATAGCATTTGATCTGCATATGATAGCGAATGCCACTGGAGGGAAGGAGAGAACGGAGTCGGAATGGAAGAAGCTGCTGAAGGAAGCAGGATTCTCTCGCTACAATTTCATCAATATCCCAGCCATTCCATCCATGATAGAGGCTTACCTCAATTGA 1059 0.4778 MELKQLEALLNSQVDVWKLLFGFVESMALNCAVELRIADVIHAHGAPIPLSKIAASINSPAPGISYLVRIMRLLVRKKIFTAHHPSDGGETLYGLTEASRWLLHGAQFSLVPMILMESHPWQLAPWHHLSQCVRDGGTAFNKAHGCDIWDFASQNPEFNNLFNNAMQSAAKIIVEAILCEYKDGFSSIGSLVDVGGGTGGFIAEIVKSHPHIKGINFDLPHVIATAQEHQGVTHVGGNMFEGSIPKADAVLLKWVLHDWSDEDCMKILNKCKEAIPEKNGKLIIVDMVLETEGNGALDETRIAFDLHMIANATGGKERTESEWKKLLKEAGFSRYNFINIPAIPSMIEAYLN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1338 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 350 IPR029063 -
Glsi14g1338 352 Gene3D - 1 102 IPR036388 -
Glsi14g1338 352 CDD AdoMet_MTases 191 289 - -
Glsi14g1338 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Glsi14g1338 352 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Glsi14g1338 352 Gene3D Vaccinia Virus protein VP39 105 350 IPR029063 -
Glsi14g1338 352 PANTHER O-METHYLTRANSFERASE 10 334 IPR016461 GO:0008168
Glsi14g1338 352 Pfam O-methyltransferase domain 126 333 IPR001077 GO:0008171
Glsi14g1338 352 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Glsi14g1338 352 FunFam O-methyltransferase family protein 104 350 - -
Glsi14g1338 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 351 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1338 Glsi-ChrGlsi14 14263860 14264994 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1338 24 332 Monolignol Biosynthesis Gene Families AT5G54160 39.683 2.26e-76 238