Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1336 ATGGAAACTGTTTTTTCCAAGCTCTCTCCGCCTATGGGGTTCAAGGGTCTGCACAAGGAAGATAAAGAGGAGGAAGAAGATTTGCTTGGGCAGGCTGAAATATGGAAGTATATGACCAGCTTCACCGACTCTGTGGCCCTGAAATGTGCTGTGGAGCTCCGCGTAGCTGACATCATAGACCATCATGGTCAACCAATGTCCTTGCCCCAAATTCTGGAGAACATTGCAGACGCACCCTCCCCTGATATCTCCTTCCTCCACCGAATCATGAGAGTGCTTGTCCGCAGAAAGATCTTCTCCGCACAACAATCTGACTCCGGAGAGACCCTCTACGGCATGACCCGTGCTTCCAAATGGATCTTACGTGACACTAAAATGACCTTGGCTCCCATGCTTCTTCTAGAGAACCACCCTTTGCATTTGAACCCAGCTCACTTTATCAGCGATTGCATCAGAGAAGGTACCAAAAATGGCACTGCCTTTTTCAGGTGCCATGGCCACGAGCAATTCGACTTGACGGGTTTGGACCCCGAATACAACCGGTTGTTCAACGAGGGCATGGTCTGCACTGCTAGGGTTGTGTCCAAGGCTGTCATCTCAGGATACAAAGATGGATTCAACAAGATTACTTCGTTGGTCGATGTAGGAGGTGGTATTGGAGGATCACTCTCTGAAATCGTCAGAGCCTACCCACACATCAAAGCCATCAACTTTGATTTGCCTCATGTGGTTGCCACTGCTCCTAAGTACGACGGAATCGCCCACGTTGGAGGAGACATGTTCGTGTCCATTCCTAGTGCTGATGCTATTTACATGAAGTGGATTCTGCATGATTGGAGCGACCAACACTGCGTCAAGATATTGAAGAACTGCAGGAAGGCTATCCCGGAGAAGACCGGGAAGGTGATTATTGTGGATCATGTTCTGCAACCGGAAGGGAATGGGCTATTTGATGACACTGGGTTCGCATTTGACATGATGCTGCTTGCACACAACGCTGGTGGGAAGGAAAGGACTGAGCAGGACTGGAAAAGGCTATTTGAAGAAACAGGGTTCGCTCGTTACAATATCATCAAAATCAAAGCTTTGCCGTCCATCATTGAGGCCTTTCCAATCTGA 1119 0.487 METVFSKLSPPMGFKGLHKEDKEEEEDLLGQAEIWKYMTSFTDSVALKCAVELRVADIIDHHGQPMSLPQILENIADAPSPDISFLHRIMRVLVRRKIFSAQQSDSGETLYGMTRASKWILRDTKMTLAPMLLLENHPLHLNPAHFISDCIREGTKNGTAFFRCHGHEQFDLTGLDPEYNRLFNEGMVCTARVVSKAVISGYKDGFNKITSLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVATAPKYDGIAHVGGDMFVSIPSADAIYMKWILHDWSDQHCVKILKNCRKAIPEKTGKVIIVDHVLQPEGNGLFDDTGFAFDMMLLAHNAGGKERTEQDWKRLFEETGFARYNIIKIKALPSIIEAFPI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1336 372 Gene3D - 17 120 IPR036388 -
Glsi14g1336 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 369 IPR029063 -
Glsi14g1336 372 SUPERFAMILY "Winged helix" DNA-binding domain 24 123 IPR036390 -
Glsi14g1336 372 PANTHER O-METHYLTRANSFERASE 34 354 IPR016461 GO:0008168
Glsi14g1336 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 35 371 IPR016461 GO:0008168
Glsi14g1336 372 CDD AdoMet_MTases 212 309 - -
Glsi14g1336 372 Gene3D Vaccinia Virus protein VP39 122 372 IPR029063 -
Glsi14g1336 372 Pfam Dimerisation domain 46 94 IPR012967 GO:0046983
Glsi14g1336 372 FunFam O-methyltransferase family protein 122 370 - -
Glsi14g1336 372 PIRSF O-mtase 15 372 IPR016461 GO:0008168
Glsi14g1336 372 Pfam O-methyltransferase domain 148 352 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1336 Glsi-ChrGlsi14 14249059 14253820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1336 45 358 Monolignol Biosynthesis Gene Families AT5G54160 39.375 2.86e-77 241