Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1331 ATGGCCGCGGCTAAGAACAGTGGCAAATCCACCGAGGGTGTTGATGACACTCACAAGGTTACGCAGATGGGAGAAAGCCAAGATTGGGAGATCGACAAGGGCAAAGATCTCGACTTTAGCAGTGAGAGGCGACAATGGAAGCCAGTTTTTGATGACGCTTCTGTGTCACATAGGCCTCTGAAGAAGATCCGTAGCCCTGAACGCCAAAGCCCAAATCAATCCTCTGTTTCAATGCTACCTACTTCCTCCTCAATTCCCTCTTCGGTTTCTCCTTCTACAGCTTCATCTTTCAATGTGTGCCCTGCTTCATCGTCTTCAAGAATCGTGTTTCCTTTTGCTTTCGATGGTTCTCAACAGCCGATGCAATTTCCCCACCAATTTGGAACCACAAATTTGCCTTTCTTTCGTCCACAGACTCACGCAACGCAAAATCAGCAACACATGATATCTTTTGGGTCCCAACAACAGAACATTGGGTATCCAACATTCTTTACCCAAGATTCTGCAGTGCTACCGCAACAGCAACAACATCAGCAGCAGCAACTTCTTCAGTATTGGAGTGACGCACTGAATCTAAGTCCCAGAGGAAGGATGATGATGATGAACAGGGTAGGGCCAGACGGCAGGCCATTGTTTAGGCCGCCGGCACAGCCTATAAATACTACTAAGCTGTACAGGGGAGTAAGGCAACGTCATTGGGGCAAATGGGTGGCTGAAATTCGTCTCCCTCGCAACAGGACTCGCCTCTGGCTGGGCACTTTTGACACAGCAGAAGATGCCGCCATGGCATATGATCGTGAGGCCTTTAAGCTAAGAGGAGAGAATGCAAGGCTCAATTTCCCCGAGCACTTTCTCGGTAAGGATAAAGAATCGTCAACTGCTCCAAATTCAGCTGCTTCTTCTCCGTCAACTCTGCACGAAGGATCAACGTCAAGTCAGAACCCAAAGCAACCTGAGTCAGCTCCAGAAGGTCGTATTGTGCAGGATCCGAATACCGAGAGGACTCCACCACCACCCCAGCCGCCAGCAGAAGAGAATACCGACAATGATTCGGGAATTGGGTCAAGTGACGCGACAATGAGTGAAGAAGTTCAGGCAACTGCTGCAGCAGGTACCGGAACAGGGGAAGGCATTTCAGCGTCACAGGAATTGGTTTGGGGAGAAATGTCCGCTTGGTTCAATGCAATTCCAGCAGGTTGGGGTCCGGGAAGCCCTGTGTGGGATGACTTGGACACCACCAATAACCTTCTGTTTCACTCACAAATTCCTTTTGTCAATCCAAATCAACAAGAATTTAATGATGCCGATACTCCTAGACAAGAAGAAAACACAGGACCAGGTTCTTCCACTTCCTCTTCTTGTCCTACGAGACCCTTCTCCTGGAAGGGTCAAGATCAAGATTGA 1404 0.4893 MAAAKNSGKSTEGVDDTHKVTQMGESQDWEIDKGKDLDFSSERRQWKPVFDDASVSHRPLKKIRSPERQSPNQSSVSMLPTSSSIPSSVSPSTASSFNVCPASSSSRIVFPFAFDGSQQPMQFPHQFGTTNLPFFRPQTHATQNQQHMISFGSQQQNIGYPTFFTQDSAVLPQQQQHQQQQLLQYWSDALNLSPRGRMMMMNRVGPDGRPLFRPPAQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPEHFLGKDKESSTAPNSAASSPSTLHEGSTSSQNPKQPESAPEGRIVQDPNTERTPPPPQPPAEENTDNDSGIGSSDATMSEEVQATAAAGTGTGEGISASQELVWGEMSAWFNAIPAGWGPGSPVWDDLDTTNNLLFHSQIPFVNPNQQEFNDADTPRQEENTGPGSSTSSSCPTRPFSWKGQDQD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1331 467 Gene3D AP2/ERF domain 224 283 IPR036955 GO:0003700|GO:0006355
Glsi14g1331 467 SMART rav1_2 224 287 IPR001471 GO:0003700|GO:0006355
Glsi14g1331 467 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 410 - -
Glsi14g1331 467 MobiDBLite consensus disorder prediction 66 95 - -
Glsi14g1331 467 FunFam Ethylene-responsive transcription factor 2 223 282 - -
Glsi14g1331 467 MobiDBLite consensus disorder prediction 290 319 - -
Glsi14g1331 467 Pfam AP2 domain 225 273 IPR001471 GO:0003700|GO:0006355
Glsi14g1331 467 MobiDBLite consensus disorder prediction 11 65 - -
Glsi14g1331 467 CDD AP2 223 283 IPR001471 GO:0003700|GO:0006355
Glsi14g1331 467 MobiDBLite consensus disorder prediction 284 359 - -
Glsi14g1331 467 MobiDBLite consensus disorder prediction 1 95 - -
Glsi14g1331 467 MobiDBLite consensus disorder prediction 345 359 - -
Glsi14g1331 467 SUPERFAMILY DNA-binding domain 224 282 IPR016177 GO:0003677
Glsi14g1331 467 ProSiteProfiles AP2/ERF domain profile. 224 281 IPR001471 GO:0003700|GO:0006355
Glsi14g1331 467 MobiDBLite consensus disorder prediction 423 467 - -
Glsi14g1331 467 PRINTS Ethylene responsive element binding protein signature 225 236 IPR001471 GO:0003700|GO:0006355
Glsi14g1331 467 PRINTS Ethylene responsive element binding protein signature 247 263 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1331 Glsi-ChrGlsi14 14213351 14214754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1331 1 409 AP2-EREBP Transcription Factor Family AT2G20880 40.534 9.02e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi14g1331 AP2 3.2e-13 CL0081