Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1307 ATGGGTTGCATAAGCTCCAAAACTTCAGCTGTGGAAGACAGCCGGGAAGGTTTGACAACGAAATTGTCATCATCGAGCAAAAGGTCCTCGGAGCTGAATGTTTCACGACTGAATTCCTCGAAAAGGGATGAGGGAGTTTGGGCCAAAAATGTGTTAGATGGTAGTGATGTGAAAGTTTCATTGATTGGAAAGAAAGCCAATGGTTCGGTGAAGTTGTATGATGATCAAATTGAGCAGAAGAAAATTGAGAAACCCGAATTAGCTGTTCTTAATCATCCCGCTCTTGGAAAGGTACCAAAGGCTACAGAAGGAGAGCAAGTTGCGGCAGGATGGCCGGGTTGGCTGTCCTCTGTTGCTGAGGAAGCTATCAAGGGGTGGATACCACGGAGTGCTACTACTTTCGAGAGGTTATATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAGGCACGTGATGTAACTAACCGAAAGATTGTTGCTTTGAAGAAAGTTCGCTTTGATAATCTTGATTCTGAGAGTGTCAAGTTTATGGCAAGGGAAATTCTTGTTCTGCGTAGGCTTGACCATCCAAACATAATAAAGTTGGAGGGCTTGATAACATCCCCGACGTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGCAGCATGATCTTACAGGACTTGCATCACGTCCTGGCATTAAGTTTTCAGAACCACAGATTAAATGCTACATGCAACAGCTTCTTAGTGGATTGGATCATTGTCACAGTCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTTATTGATAATAATGGCATCTTAAAGATCGCAGATTTTGGTTTGGCAAGTTTTTTTGACCCCCATCACAGTGTTCCATTGACCAGCCGAGTAGTGACTCTGTGGTATAGACCACCAGAGCTTTTATTTGGAGCATCTCATTATGGAGTTGCGGTGGATTTGTGGAGCACTGGTTGTATACTGGGGGAACTATATTCTGGCAGGCCCATATTGCCAGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCACCTCAGGATTACTGGCTTAGATTGCGGTTGCCACATTCAACAGTATTCAAGCCTCCTCACCATTATAGACGATGTGTCGCTGAAACATTCAAGGAATATCCCTCTGCTTCCGTGAAGCTTATAGAGACCCTTCTTTCCATAGATCCTGCTCAGCGAGGAACAGCAGCTACTGCTCTGAAAAGTGAGTTCTTTGCAGTGGAACCTCTTGCTTGTGATCCATCGAGTTTACCAAAATATCCTGCCAGCAAAGAGATTGATGCTAAATTGCGGGATGAAGCAACCAGAAGGCAAGGACCAGTTAGAGGAAGGGAGCAGAAAGTTGGCTTGAGAGTTAGACAAGAGAAAGAACTTCAGACACTGGCAGCAAATAACAATGTTGACCCACGCATATCAATGCAGCAAGGACGTCATTCCAGCTCAAGGGGCCACGGTGAATTGTTCAATCCTCACAGAGAATCTGCATCTGGATTGTTGGTTTTCCCACATGGACAGTCAGAAGATGTTAAAGAAATGGAAAATAATTTCTCTGGGCATCTTTATAAGAGGCCTTCACATTCTGGTCCATTGGTTCAGGGCCCTGGCTGGACGAAGGTTGGGAAGGAAGTGGATGATCCGCATCTTCTTTCAAACAGAGTCAACCTATCAAAACTATCTGGTTTAGTTGCTCCTAGGACTTCAGTGTCTAAACATCAGGAGGAAAAATCAGTTCCCTCACAGCATGGAAAAACAGTTGACCTACGAAAATCTTTGGAGTCAATTAATGGATCGGAGTCAAGAAGAAGGCAGGATCAAAAACGCCAGTCTCAGAGAATTGTTGATCTCTGTCATATAGAAAATGGAAGGACCCCCACCAAAGAATTAGCTCCGGAAGGGCGGGGTTCCAGGGGAAACAAGATCTATCTCTCTGGTCCATTACTGCTTTCATCAAACAACATGGATCAGATGCTTAAAGAACATGATCAAAAGATCCAGGAATATTCAAGACGAGCGAGAATTGACAAGTCAAGAGGTGAGAAAGTTCGTGCACGGCGAAAGTAG 2100 0.4414 MGCISSKTSAVEDSREGLTTKLSSSSKRSSELNVSRLNSSKRDEGVWAKNVLDGSDVKVSLIGKKANGSVKLYDDQIEQKKIEKPELAVLNHPALGKVPKATEGEQVAAGWPGWLSSVAEEAIKGWIPRSATTFERLYKIGQGTYSTVYKARDVTNRKIVALKKVRFDNLDSESVKFMAREILVLRRLDHPNIIKLEGLITSPTSRSLYLVFEYMQHDLTGLASRPGIKFSEPQIKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLFGASHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPPQDYWLRLRLPHSTVFKPPHHYRRCVAETFKEYPSASVKLIETLLSIDPAQRGTAATALKSEFFAVEPLACDPSSLPKYPASKEIDAKLRDEATRRQGPVRGREQKVGLRVRQEKELQTLAANNNVDPRISMQQGRHSSSRGHGELFNPHRESASGLLVFPHGQSEDVKEMENNFSGHLYKRPSHSGPLVQGPGWTKVGKEVDDPHLLSNRVNLSKLSGLVAPRTSVSKHQEEKSVPSQHGKTVDLRKSLESINGSESRRRQDQKRQSQRIVDLCHIENGRTPTKELAPEGRGSRGNKIYLSGPLLLSSNNMDQMLKEHDQKIQEYSRRARIDKSRGEKVRARRK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1307 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Glsi14g1307 699 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Glsi14g1307 699 CDD STKc_CDK9_like 134 418 - -
Glsi14g1307 699 SUPERFAMILY Protein kinase-like (PK-like) 129 419 IPR011009 -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 578 650 - -
Glsi14g1307 699 PANTHER CELL DIVISION PROTEIN KINASE 133 423 - -
Glsi14g1307 699 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1307 699 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Glsi14g1307 699 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1307 699 Gene3D Transferase(Phosphotransferase) domain 1 217 455 - -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 581 626 - -
Glsi14g1307 699 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 1 42 - -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 674 691 - -
Glsi14g1307 699 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Glsi14g1307 699 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1307 699 Coils Coil 663 683 - -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 674 699 - -
Glsi14g1307 699 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1307 Glsi-ChrGlsi14 14045240 14051440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1307 120 451 Core Cell Cycle Gene Families AT5G10270 49.859 1.80e-113 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi14g1307 Pkinase 1.3e-67 CL0016