Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1305 ATGAGAGAACTCAATAGACTGTTTGCAGACATATGCACACAAAATTTAGGCATCATTTCCTCTGCAGATCATATTACGAAACCAAGCCCAGGGTCGGCAACTGAATTTGTCTACAACACAGATTTCAACTCCACCAACATATCCCTGGATGTAAATGCCACTGTTGAGTCTTCCATTCTCACTCTTACCAATAAGAGTTCCTTCTCCACTGGCCGTGCTTTTTACCCTCACAAAATACCCACAAAGCAAGCTAACTCTTCCATCCTTCTCCCCTTTGCTACCTCCTTCATTTTCTCTATTATCCCAGCTAAACATGTTCTTACTGGTTATGGCTTTGCTTTCTTATTCTCACCATCTCCGGGCACAAACGGCACGAGCCCATCTGAGTATATTGGTCTTTTGAATTTCACTAATCAAGGTAATCCTCGCAACCATGTTGTTGGGATTGAGTTTGATGTAGTTAATAATGAAGAATTCGATGATATGGACAACAACCATGTTGGAATTGATATAAACTCGCTTACTTCAATAACTTCGCATGAAGCCGGATATTGGGGTGGAGAAAAAGATGATAAATTTGAGCAGTTGAAGCTAATCAATGGAGAAAATTATCAGGTTTGGATTGAATTTGTGGATTCACAGCTTAACGTCACCATGGCTCGGGCAGGAACTAAAAGGCCTCGAAGCCCTTTGATAAGTGAGAAAGTTAACCTTTCAGGGGTTTTATTGGATGAAATGTACGTTGGGTTTTGTGCAGCAACAGGGCGATTGGTGGATTATACTAGAATTATGGCTTGGAGTTTCAGTCATTCGAATTTTTCTATAGGTGATGCTTTGGTGACAAATAATTTGACTTCATTTGCAATTCAAAAAGGGTTGTTAGCTCAAGTTTTCTTAATAGCAGTAACTGTTGTTACTATAATCTCAATTGGCTGTTTCTCTATGGTATTTTTCATTTTATGGAGTAGGAAAGGTGAGTCCGAGGAAAGATTGGAAGATTGGGAGCTGGACTACTGGCCCCATAGGATCAGTTACCAAGAGATTAATGCAGCTACAAGAGGGTTCTCTGAAGAGAATGTGATTGGAATTGGAAGACATGGAAAGGTTTATAAAGGGATACTGCGAGGAGTAAAAGTTGCAGTCAAGAGAATCCCTCAGGAAACAGAGGAAGGGATGAGGGAGTTTTTGGCTGAAGTTTCAAGCCTAGGAAGAATGAAGCACAGAAATTTAGTAGGCATTAGAGGTTGGTGCAAAAGAGAGAAAGTAAGCTTGATACTGGTTTATGATTATATGGAGAATGGAAGCTTGGATAAAAGTGTCTTTGAGTGTGAAGAGAGAAAGATGCCAAGTTGGAAAGAGAGCATTGAAGTCTTGAAAAATATAGCTGCTGGAATTCTATTTCTACACGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATCAAGGCAAGCAACGAGCTACTTGATAAGGATATGAATGCCAGGTTGGGGTATTTTGGATTAGCTTAAGTGGTTTGTGGGCGAAGACCTGTTGAGGATGACAAGCCAGGACTGATTCAGTGGGTAACGTCCCTAAGCGAGATTGGCGAATTGCATTTTGCTCTTGATCAGAGGTTGAAGAACAAAGATCCTAGTCTCAGACCCACAATGAGGCAGGTTGTCAAAATGCTGGAAGGGGAGATTGAAGGCAATGATTCTGAAGTGAAGATGGTGAAAGTGAGTTTACTTGAAAAAATAAAATCAGCAGCAATTTGGTCTGATTCTTCTCGATACAGAAATCACCCTACAATAGAAATGATTAGAAAGTTCAATTCTAATTCTGAAACGTCTAGAATTAACTCATATTATACCATCCCAGATTTGGACGTCACCCTGGAAGGCAGATAA 1887 0.4043 MRELNRLFADICTQNLGIISSADHITKPSPGSATEFVYNTDFNSTNISLDVNATVESSILTLTNKSSFSTGRAFYPHKIPTKQANSSILLPFATSFIFSIIPAKHVLTGYGFAFLFSPSPGTNGTSPSEYIGLLNFTNQGNPRNHVVGIEFDVVNNEEFDDMDNNHVGIDINSLTSITSHEAGYWGGEKDDKFEQLKLINGENYQVWIEFVDSQLNVTMARAGTKRPRSPLISEKVNLSGVLLDEMYVGFCAATGRLVDYTRIMAWSFSHSNFSIGDALVTNNLTSFAIQKGLLAQVFLIAVTVVTIISIGCFSMVFFILWSRKGESEERLEDWELDYWPHRISYQEINAATRGFSEENVIGIGRHGKVYKGILRGVKVAVKRIPQETEEGMREFLAEVSSLGRMKHRNLVGIRGWCKREKVSLILVYDYMENGSLDKSVFECEERKMPSWKESIEVLKNIAAGILFLHEGWEVKVLHRDIKASNELLDKDMNARLGYFGLAXVVCGRRPVEDDKPGLIQWVTSLSEIGELHFALDQRLKNKDPSLRPTMRQVVKMLEGEIEGNDSEVKMVKVSLLEKIKSAAIWSDSSRYRNHPTIEMIRKFNSNSETSRINSYYTIPDLDVTLEGR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1305 628 Gene3D - 32 271 - -
Glsi14g1305 628 Gene3D Transferase(Phosphotransferase) domain 1 431 505 - -
Glsi14g1305 628 FunFam L-type lectin-domain containing receptor kinase S.4 32 276 - -
Glsi14g1305 628 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 273 IPR013320 -
Glsi14g1305 628 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Glsi14g1305 628 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 317 430 - -
Glsi14g1305 628 Pfam Legume lectin domain 34 272 IPR001220 GO:0030246
Glsi14g1305 628 SUPERFAMILY Protein kinase-like (PK-like) 336 560 IPR011009 -
Glsi14g1305 628 SMART serkin_6 355 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1305 628 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1305 628 CDD lectin_legume_LecRK_Arcelin_ConA 34 269 IPR001220 GO:0030246
Glsi14g1305 628 PANTHER - 54 503 - -
Glsi14g1305 628 Gene3D Phosphorylase Kinase; domain 1 321 430 - -
Glsi14g1305 628 Pfam Protein kinase domain 356 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1305 Glsi-ChrGlsi14 14039966 14044147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1305 28 527 Receptor kinase-like Gene Family AT4G04960 50.624 1.66e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi14g1305 Lectin_legB 2.5e-60 CL0004