Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1304 ATGATTTTCTCGGTTATAGTGTTGCAGAATCCAGGTTCGGGATCTCACTTTGTCTCTCTAATCCTCTTGCTAATGTCTACCAGGAGCTCCTTCTTCCTCCTCTTCCTTGGCACAGCTCTTCTAAGTTCAGTGTCAGCGACTGAATTTGTTTATAACAGAGACTTCAATTCCACCAATATTTTCCTCTCTGGCAATGCCACCATCCAACACTCCGTTATTACTCTAACCAACCAGACCTTCTTCTCCATAGGCCGTGCCTTTTACCCTTACAAAATACCCATGAAATCATCCCACTCTTCCACCCCTCTATCCTTTGCCACCTCCTTTATCTTTTCCATCGCTCCGTGTAAAGGCTTCCCCATTGGTCATGGCTTTGCTTTTATACTCTCTCCTGCGATGGGCATAACTGGCGTAACATCAGGGAATTATCTGGGTATTTTTAATCGCTCCAATGTCGGTAATTCTTCCGACCATATTTTTGGTATTGAGTTTGATGATTTTAGAAACGAAGAATTCGATGATATAAATGATAATCATGTGGGTGTTGACTTGAATTCACTTCTTTCCCGGTATTCACAACCCGCTGGATTCTGGGGTGGAAGAAATGGTGAGAAATTGGAGGAGCTGAAACTGGATAATGGACAAGACTATCAAGTGTGGATTGAGTTTCTGGATTCACGGCTTAATATTACTATGGCCGTAGCAGGGAAACGAAAGCCTCAAAAGCCTTTGATTAGTACCCCTATTAACCTTTCTGATGTTCTGTTAAATGAAATGTATGTTGGGTTCTCTGGATCAACAGGGCGATTGGTAGACATATGTAGAATTTTAGCTTGGAGTTTTAGCAATTCGAACTTTTCAATTGGCGATGCTTTGCTGACACAAAATTTGCCCTTGTATGTGCATCCAAAGGCGCTGATAGTTAGAACAAAAGGGTTTATTGTAGGTGTCACTTTTGGTGCTCTGTTTGTCACTGGCTGCTGCATTTTGGTGTTTTTAAGTTTCTCCAGAACCAAAAGGGAAGGGAAAGAGGATGAGGAGAATAACATTGAAGACTGGGAATTGGAGTATTGGCCACATAGGATTAGCTACCAAGAAATTAGTGCTGCTACCGGGGGATTCTCCGAAGAGAATGTGATTGGGGTTGGAACAAGTGGTAAAGTATATAAAGGAGTTTTGCAAGGAGTAGAAGTTGCAGTGAAGAGAATCCCTCATGACACAGAGTACGGGATGAGAGATTTTCTGGCTGAGATTTCAAGCCTAGGCAGAATGAAACACAGGAATTTAGTGGGTTTTAGAGGTTGGTGTAAAAGAAAAAGAGGAAACTTGATACTGGTTTATGATTATATGGAGAATGGGAGCTTGGACAAAAGGATTTTTGGGTGTGAAGAGAGCATGCTGCTGAGCTGGGAACAAAGAATTAGCGTTTTACTAAACGTAGCTTGTGGAATCTTTTATCTACATGAGGGTTGGGAAGTTGAGGTATTACATAGAGACATCAAATCCGGCAATGTGCTGCTTGACAAAGATATGAATGCTAGATTGGGAGATTTTGGGCTAGCCAGATTGCATCACCAGGGCCACTTGGCTGACACTACAAGAGTGATAGGGACTCCGGGGTACATGGCACCTGAACTAGTTCGAATTGGGCGACCATCAAAAGCTACTGATGTTTATAGCTTTGGTATACTGGTTTTGGAGGTGGTTTGTGGACGAAGACCCATTGTAGCAGACAAACCATCACTGATTGACTGGGTATTATGCCTTATAGAGAGCGGCGAATTGCATAGTGCTCTTGACGAGCGTTTGAAGGCTCAAGGTGAGTGCCCCATTGAGCAAGTTGAGAGAGTGCTTCAGTTGGGTTTGTTTTGTGCAAGTTCAGACCCTAGAGTTAGACCAACAATGAGGCAGGTAGTGATAGTATTGGAGAAAATTAAAGACGCCGAGTATGATGAAGAGTGTTTCGATGTGAATTTGCTAGAAAAAATAAACTCAGCAGCAACGTGGTCTAGAATTTCTTCGAAATCTACCGAAGGAAGTCATCCGACTTTTGAGGAAATTTTGCAGTGCAAATATTATAGCACAATGACTCTAAGCGGCTCCTATCCCGTCCCACAATCAGAGTCAGACTTCGTCCCATAA 2142 0.4267 MIFSVIVLQNPGSGSHFVSLILLLMSTRSSFFLLFLGTALLSSVSATEFVYNRDFNSTNIFLSGNATIQHSVITLTNQTFFSIGRAFYPYKIPMKSSHSSTPLSFATSFIFSIAPCKGFPIGHGFAFILSPAMGITGVTSGNYLGIFNRSNVGNSSDHIFGIEFDDFRNEEFDDINDNHVGVDLNSLLSRYSQPAGFWGGRNGEKLEELKLDNGQDYQVWIEFLDSRLNITMAVAGKRKPQKPLISTPINLSDVLLNEMYVGFSGSTGRLVDICRILAWSFSNSNFSIGDALLTQNLPLYVHPKALIVRTKGFIVGVTFGALFVTGCCILVFLSFSRTKREGKEDEENNIEDWELEYWPHRISYQEISAATGGFSEENVIGVGTSGKVYKGVLQGVEVAVKRIPHDTEYGMRDFLAEISSLGRMKHRNLVGFRGWCKRKRGNLILVYDYMENGSLDKRIFGCEESMLLSWEQRISVLLNVACGIFYLHEGWEVEVLHRDIKSGNVLLDKDMNARLGDFGLARLHHQGHLADTTRVIGTPGYMAPELVRIGRPSKATDVYSFGILVLEVVCGRRPIVADKPSLIDWVLCLIESGELHSALDERLKAQGECPIEQVERVLQLGLFCASSDPRVRPTMRQVVIVLEKIKDAEYDEECFDVNLLEKINSAATWSRISSKSTEGSHPTFEEILQCKYYSTMTLSGSYPVPQSESDFVP 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1304 713 SUPERFAMILY Protein kinase-like (PK-like) 349 643 IPR011009 -
Glsi14g1304 713 FunFam L-type lectin-domain containing receptor kinase S.4 45 289 - -
Glsi14g1304 713 ProSitePatterns Protein kinases ATP-binding region signature. 380 401 IPR017441 GO:0005524
Glsi14g1304 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Glsi14g1304 713 CDD STKc_IRAK 380 645 - -
Glsi14g1304 713 Pfam Legume lectin domain 47 285 IPR001220 GO:0030246
Glsi14g1304 713 Pfam Protein kinase domain 375 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1304 713 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 336 449 - -
Glsi14g1304 713 ProSiteProfiles Protein kinase domain profile. 374 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1304 713 Gene3D Transferase(Phosphotransferase) domain 1 450 665 - -
Glsi14g1304 713 SMART serkin_6 374 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1304 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 287 IPR013320 -
Glsi14g1304 713 PANTHER - 63 644 - -
Glsi14g1304 713 Gene3D Phosphorylase Kinase; domain 1 334 449 - -
Glsi14g1304 713 CDD lectin_legume_LecRK_Arcelin_ConA 47 284 IPR001220 GO:0030246
Glsi14g1304 713 Gene3D - 45 292 - -
Glsi14g1304 713 FunFam L-type lectin-domain containing receptor kinase S.4 450 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1304 Glsi-ChrGlsi14 14037039 14039180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1304 44 591 Receptor kinase-like Gene Family AT4G04960 54.973 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi14g1304 Pkinase 1.7e-44 CL0016