Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1301 ATGTGGAGGGAGCATGGCACGTTCGAGGAAGGGAGGAGGAATGATCGTTGGAGGTGGTGTGTTGGGACATGGGAGAATTCATGCATGCGTTGGAGTGGGGAACAAAGCGAAGCCGTAATTCGCACAGTGAAACTGCATCAATGTGTACTTCTACTTCTACGCACAACAACCCGCGTCTCTCGGGCGTCAAGTCTCCGCCTACCTTCACAGTAAAACAAAACAAAGCAGATTATTCACCGGTTTCCTAGGATAGACAAATTAAAGCGTACAAAGAAAAAGCTTCCGCAACCAAGTCCGTCTTCGTCTTCCACCAAGATGGAAAGAAGGCTGGTAGAGAAAAACAGAAGAAACCAGATGAAGATCCTCCACTCCAAACTCAACTCGCTTCTACCAAACTATAATCCCAAGGAAACGATTCCACTGCCTGATCAGATAGACGAGGCCATAAACTACATTAAGAGCCTAGAGGAAAAGGTGAAGATGGCCCAGGAGAAGAAAGAAAGCTTAATGGGAATTAGGAAAAGATCACATACTTGCTCCTCCAGTTCGAATTATGAAACGAAAGGAAGCCTAAGATCACCACAAATCGAGATTCATGAAATGGGTTCCTCCCTAGAAGTTGTTCTGATTAGTGGCTTGGACAACCACTTCATTTTTTATGAAATTATTCGCATACTGCACGAAGAGAACGTAGAGGTTGTAAGTGCCAATTCCTCACTGCAGGCCCCAGGTTCAATGCTTCACACTGTGCATGCACAGATTCAGCCATCTTTACTTCAATTCGGAGCTACCAAAGTAAGCGAGAGATTGAAAAGGTTTGTGTATGGATCTGCCAGTGATGTGCAAATACATCCTGACTTGTGGGATTTTCAAATTGGTACTAATACGTGGGACTTCTAA 900 0.4456 MWREHGTFEEGRRNDRWRWCVGTWENSCMRWSGEQSEAVIRTVKLHQCVLLLLRTTTRVSRASSLRLPSQXNKTKQIIHRFPRIDKLKRTKKKLPQPSPSSSSTKMERRLVEKNRRNQMKILHSKLNSLLPNYNPKETIPLPDQIDEAINYIKSLEEKVKMAQEKKESLMGIRKRSHTCSSSSNYETKGSLRSPQIEIHEMGSSLEVVLISGLDNHFIFYEIIRILHEENVEVVSANSSLQAPGSMLHTVHAQIQPSLLQFGATKVSERLKRFVYGSASDVQIHPDLWDFQIGTNTWDF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1301 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 170 IPR036638 GO:0046983
Glsi14g1301 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 103 155 IPR011598 GO:0046983
Glsi14g1301 299 FunFam Transcription factor bHLH162 96 181 - -
Glsi14g1301 299 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 100 275 - -
Glsi14g1301 299 Pfam Helix-loop-helix DNA-binding domain 106 156 IPR011598 GO:0046983
Glsi14g1301 299 Gene3D - 97 184 IPR036638 GO:0046983
Glsi14g1301 299 MobiDBLite consensus disorder prediction 86 111 - -
Glsi14g1301 299 Coils Coil 145 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1301 Glsi-ChrGlsi14 14005250 14008853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1301 95 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.433 1.33e-28 107