Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1272 ATGAACAACATGACTGGCAGAGAAATCCTCTTTAAGATGAAGGCAAAAGCAGGGTTTGGGACATCAGCAACTGACACGGGGAAAGGAAAAAGCAAAATATCAAAGCATATCACGCATGGCTTCCACTTAATGAAGGGAAAATCAGGCCATGCTATGGAAGATTATGTAGTTTCCCAGTTTAAGCAGGAGAAGGACAAAGAGTTAGGCTTGTTTGCAATATTTGATGGTCATTTAGGTCATGACGTTGCAAGCTATTTGCAGAACCACCTTTTTGACAACATTTTGAAACAGCCTGACTTCTGGAATGAAACAGCAAGCGCAGTAAAGAGAGCTTATCTTACAACAGATGAGAAAATACTGGAACAAGCCCTTGTCTTGGGACGAGGAGGATCAACTGCAGTAACTGCAATACTTATTAATTGTCAGAAACTTGTAGTAGCAAATGTTGGAGACTCTCGAGCAGTTATTTGCAAGAATGGAAAGGCCAAGCAACTATCCGTTGATCATGAGCCAAGCAAGGAAAAAAGATTGATTGAGAGCCGTGGTGGTTTTGTATCTAACATTCCAGGAGATGTGCCTCGTGTAGATGGACAATTGGCTGTAGCAAGGGCTTTTGGTGATAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTAATTGTAGAGAAGGTAGACGAAGATACAGAATTCCTTATTCTAGCAAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTGGACTCTATTAGACAAAAAAAGGATGCTCGGGCTGCAGCAAAGCACCTGATAGAGGAGGCTGTTGCTAGGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA 861 0.4158 MNNMTGREILFKMKAKAGFGTSATDTGKGKSKISKHITHGFHLMKGKSGHAMEDYVVSQFKQEKDKELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNETASAVKRAYLTTDEKILEQALVLGRGGSTAVTAILINCQKLVVANVGDSRAVICKNGKAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVIVEKVDEDTEFLILASDGIWKVMSNQEAVDSIRQKKDARAAAKHLIEEAVARKSKDDISCIVVKFQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1272 286 SMART PP2C_4 28 283 IPR001932 -
Glsi14g1272 286 SMART PP2C_SIG_2 43 285 IPR001932 -
Glsi14g1272 286 PANTHER PROTEIN PHOSPHATASE 32 285 IPR015655 GO:0004722|GO:0006470
Glsi14g1272 286 CDD PP2Cc 39 285 IPR001932 -
Glsi14g1272 286 FunFam Probable protein phosphatase 2C 39 28 286 - -
Glsi14g1272 286 Pfam Protein phosphatase 2C 50 278 IPR001932 -
Glsi14g1272 286 Gene3D - 20 286 IPR036457 -
Glsi14g1272 286 ProSiteProfiles PPM-type phosphatase domain profile. 38 285 IPR001932 -
Glsi14g1272 286 SUPERFAMILY PP2C-like 34 285 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1272 Glsi-ChrGlsi14 13727358 13729762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1272 4 286 PP2C-type Phosphatase Gene Family AT3G15260 74.048 1.08e-153 429