Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1262 ATGCTCGTCGCGGTGTCACCTTTTAGAAGCACCAAAGATGAAAACCAAGGAGAGATGGAGAGGTTTTCCATTGAAGCTGGTGAATTTGCTGATCTTTCCGACGGGAATTTATTGGAAAGCATCGATTTTGAAGATCTTTTCGTGGGTATCAACGACGGAGATGTGTTGCCGGATTTGGAAATTTTCACTGACTTCTCCGTCAGCTGTGGCGAGGAGTCATCAGTTTCAGTGGAAAATAGTAAAGTGGATCAGAGCATAACGACGAAGAAAGAAGAAGATAAAGTTTCTTCTGGTCCGGATTCAAATTCTGGGTCTAGCCGAGGAGAGGAGATAGTGAGCAAAAGTGATGAATCTGCGGTGGTCAACCCGTCGTCAAAGGAAGGTGAAAAAAGAAGAAAATCGTCAGTTCAATCAAAGAACTCTCCAGGGAAGAGAAAAGTTAAGGTGGATTGGACCCCCGAATTGCACAGGCGATTCGTACAAGCAGTGGAGCAACTAGGAGTGGATAAAGCAGTGCCTTCAAGAATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCCAGCCATCTCCAGAAATATCGATCCCATAGGAAACATTTGCTAGCACGTGAAGCTGAAGCAGCAAGCTGGAGTAAAAGAAGACAATCGTATGGTGCAGCCGGAGCAGGAGGCAAGAGAGACGTGAGCCCTTGGCTAGCAGTAGCACCCACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGACCCCTACATGTATGGGGGCATCCCCCCATAGACCAGTCCTTTATGCACTGGTGGCCTAAGCATCTACAACACTCTTCGTCACCACCACCGCTAGCATGGGCGCCGCCCGCAGCCCCACGCCCTCCAGACCCTTCATATAATTGGCACGCTCAGCACCAACCGGCTCCAAATGCATTAACCCCAGGAACAACTACTTGTTTTCCACAACCCCTGACTACAACGAGATTTCCCTCTCCACCTGTCCCGGGCATCCCACCCCAAGCCATGTACAAAGTAGATCCCGGCATTGGAGTCCCCACTGGGCAACCCGGTCCCTGGCCACTCATTGACTTTCATCCGTCAAAGGAGAGTATAGATGCAGCTATTGGAGATCTTTTATCAAAACCATGGCAGCCACTCCCTCTTGGCCTTAAAGCTCCAGCGCTTGATAGTGTGTTGGGTGAATTACAGAGACAAGGAATTCCGAAAATTCCACCCTCTTGTGCTTGA 1251 0.4892 MLVAVSPFRSTKDENQGEMERFSIEAGEFADLSDGNLLESIDFEDLFVGINDGDVLPDLEIFTDFSVSCGEESSVSVENSKVDQSITTKKEEDKVSSGPDSNSGSSRGEEIVSKSDESAVVNPSSKEGEKRRKSSVQSKNSPGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSKRRQSYGAAGAGGKRDVSPWLAVAPTMGFPPMTPMHHFRPLHVWGHPPIDQSFMHWWPKHLQHSSSPPPLAWAPPAAPRPPDPSYNWHAQHQPAPNALTPGTTTCFPQPLTTTRFPSPPVPGIPPQAMYKVDPGIGVPTGQPGPWPLIDFHPSKESIDAAIGDLLSKPWQPLPLGLKAPALDSVLGELQRQGIPKIPPSCA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1262 416 NCBIfam myb-like DNA-binding domain, SHAQKYF class 146 200 IPR006447 GO:0003677
Glsi14g1262 416 FunFam Two-component response regulator 142 205 - -
Glsi14g1262 416 Gene3D - 143 204 - -
Glsi14g1262 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 202 IPR017930 -
Glsi14g1262 416 PANTHER TRANSCRIPTION ACTIVATOR GLK1 3 415 IPR044825 GO:0003700|GO:0045893
Glsi14g1262 416 MobiDBLite consensus disorder prediction 73 149 - -
Glsi14g1262 416 Pfam Myb-like DNA-binding domain 149 198 IPR001005 -
Glsi14g1262 416 SUPERFAMILY Homeodomain-like 144 203 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1262 Glsi-ChrGlsi14 13669754 13672306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1262 26 275 G2-like Transcription Factor Family AT5G44190 47.244 5.56e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi14g1262 Myb_DNA-binding 5.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1262 14 13669754 13672306 Glsi14g1262 14 13669754 13672306 ECH