Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1258 ATGACTCAGTGCAATGACTCCCAAAATAGTCACAGCAATATCGTTGTGGAGAGAAGCAAAGACAGCCTAATTAGAACCTGCCCTTCATGTGGTCATCATATCAAAAGCCAAGAGCAGGGTGGAATCCATGACTTACCTGGACTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGTGCTTCTTGAACATTTGGAAGCCAAGGTGCGGTCTGATATTCATAAGCTTCATCCTTTAATCGATGAGTTCATACCTACGCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCGGAGAAGTTGCCAGGAGTAAGCAAAGATGGCCTGGTCCGCCATTTCTTTCATCGGCCTTCCAAAGCATACACAACTGGAACAAGGAAAAGGAGAAAGGTGCATACCGATGTGGACGGCAGTGAGACCCGGTGGCACAAAACGGGTAAGACCAGGCCAGTCTATGTTAATGGCAAGTTGATAGGGTACAAGAAAATTCTTGTGCTTTACACCAACTATGGAAAGCAAAGAAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCATCTTGGCTATAATGAAGAGGAGAAAGAAGGAGAATTAGTGGTCTCAAAGGTTTTTTATCAAACACAACCTAGGCAATGTGGTTCACTGGTGAAAGACTCAGTTCCTGCAAAACTAAAGGGCCAAGGCATGTGCGAGGCAGCAAATCATAAAAACAATAATGGGTTTGTTGAGTACTACAATTCTTCTTTCTTATCCTTTGATCAAGGGAGCCAACAGAGATCAAGCAATTCTCATGTAATTTCCCATTTTTCTGTTCATGATGGTTCTCCTTTCATTCCTTGA 843 0.4353 MTQCNDSQNSHSNIVVERSKDSLIRTCPSCGHHIKSQEQGGIHDLPGLPAGVKFDPTDQVLLEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDVDGSETRWHKTGKTRPVYVNGKLIGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGYNEEEKEGELVVSKVFYQTQPRQCGSLVKDSVPAKLKGQGMCEAANHKNNNGFVEYYNSSFLSFDQGSQQRSSNSHVISHFSVHDGSPFIP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1258 280 FunFam NAC domain-containing protein 73 57 211 - -
Glsi14g1258 280 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Glsi14g1258 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 231 IPR044799 GO:0003700
Glsi14g1258 280 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Glsi14g1258 280 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Glsi14g1258 280 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1258 Glsi-ChrGlsi14 13640957 13642379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1258 1 280 NAC Transcription Factor Family AT4G28500 59.937 6.99e-122 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g1258 NAM 4.3e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1258 14 13640957 13642379 Glsi14g1258 14 13640957 13642379 ECH